Publications
 
   
Publications for year between 2016 and 2017


Books: 1
Book Chapters: 2
2016
-Cristina Mota and Paula Carvalho and Francisco Afonso Raposo and Anabela Barreiro, , chapter of Generating Paraphrases of Human Intransitive Adjective Constructions with Port4NooJ, Mar. 2016, Springer, [bibTex]
-Carlos Páscoa and José Manuel Nunes Salvador Tribolet, Actor Network Theory Applied to Organizational Change: A Case Study, Chapter 60, 1314-1330, chapter of Web Design and Development: Concepts, Methodologies, Tools, and Applications., Jan. 2016, IGI Global, [bibTex]

International Journal Articles: 14
2017
-Rui Miguel Carrasqueiro Henriques and Francisco Luis Sarreira Lourenço Ferreira and Sara Alexandra Aires da Encarnação, BicPAMS: Software for Biological Data Analysis with Pattern-based Biclustering, article in BMC Bioinformatics, to appear on 2017, Biomed Central, [bibTex]
-Rui Miguel Carrasqueiro Henriques and Francisco Luis Sarreira Lourenço Ferreira and Sara C. Madeira, BicPAMS: software for biological data analysis with pattern-based biclustering, article in BMC Bioinformatics, Feb. 2017, [DOI Article link][bibTex]
2016
-Paulo Jorge Fernandes Carreira and José Cavalheiro, A multidimensional data model design for building energy management, article in Advanced Engineering Informatics pp. 619-632, to appear on 2016, Elsevier, [DOI Article link][bibTex]
-Paulo Jorge Fernandes Carreira and Pedro Lima and Pedro Fazenda, Context-based thermodynamic modeling of buildings spaces, article in Energy and Buildings pp. 164-177, to appear on 2016, Elsevier, [DOI Article link][bibTex]
-André Veríssimo and Arlindo L. Oliveira and Marie-France Sagot and Susana Vinga, DegreeCox–a network-based regularization method for survival analysis, article in BMC Bioinformatics pp. 109-121, Dec. 2016, Biomed Center, [DOI Article link][bibTex]
-Rui Miguel Carrasqueiro Henriques and Sara C. Madeira, BiC2PAM: constraint-guided biclustering for biological data analysis with domain knowledge, article in Algorithms for Molecular Biology pp. 1-23, Sep. 2016, [DOI Article link][bibTex]
-Marta Alexandra Fragoso Nascimento and A. Sousa and M. Ramirez and A. P. Francisco and João Carriço and Cátia Vaz, PHYLOViZ 2.0: Providing scalable data integration and visualization for multiple phylogenetic inference methods, article in Bioinformatics, Sep. 2016, [DOI Article link][bibTex]
-André Menolli and H. Sofia Pinto and Sheila Reinehr and Andreia Malucelli, SECOL: a semantic environment based on social media to support organisational learning, article in Behaviour \& Information Technology (1) pp. 1-26, Sep. 2016, Taylor&Francis, [DOI Article link][bibTex]
-Rui Miguel Carrasqueiro Henriques and Sara C. Madeira, BicNET: Flexible Module Discovery in Large-Scale Biological Networks using Biclustering, article in Algorithms for Molecular Biology pp. 1-30, May 2016, BioMed Central, [DOI Article link][bibTex]
-Miguel Costa and Daniel Gomes and Mário J. Silva, The Evolution of Web Archiving International Journal on Digital Libraries, article in International Journal on Digital Libraries, May 2016, Springer, [Article][DOI Article link][bibTex]
-Pedro Rijo and A. P. Francisco and Mário J. Silva, Evaluating the impact of k-anonymization on the inference of interaction networks, article in Transactions on Data Privacy pp. 49-72, Apr. 2016, U. of Skövde,, [Article][bibTex]
-Luís M. S. Russo and A. P. Francisco, Extending quick hypervolume, article in Journal of Heuristics pp. 1-27, Mar. 2016, Springer, [Article][DOI Article link][bibTex]
-Luis de Sousa and Alberto Rodrigues da Silva, A Domain Specific Language for Spatial Simulation Scenarios, article in GeoInformatica pp. 117-149, Jan. 2016, Springer, [Article][bibTex]
-B. Ribeiro-Gonçalves and A. P. Francisco and Cátia Vaz and M. Ramirez and João Carriço, PHYLOViZ Online: web-based tool for visualization, phylogenetic inference, analysis and sharing of minimum spanning trees, article in Nucleic Acids Research, Jan. 2016, [DOI Article link][bibTex]
International Conferences: 20
2016
-Diogo Proença and José Manuel Nunes Salvador Tribolet and José Borbinha, Modeling the Value of Digital Preservation Activities, presented at  CENTERIS 2016 - Conference on ENTERprise Information Systems ,October 5-7, 2016, Oct. 2016, Elsevier, [DOI Article link][bibTex]
-Ana Tellha and Alexandre Rodrigues and Carlos Páscoa and José Manuel Nunes Salvador Tribolet, The Competency Architecture as Error Limiting Element and Efficiency Enhancer in Business Processes, presented at CENTERIS 2016 - Conference on ENTERprise Information Systems ,October 5-7, Oct. 2016, Elsevier, [DOI Article link][bibTex]
-Ana Telha and Alexandre Rodrigues and Carlos Páscoa and José Manuel Nunes Salvador Tribolet, Transversal Competency Concept as a Structuring Element of the Organization, presented at CENTERIS 2016 - Conference on ENTERprise Information Systems,October 5-7, 2016, Oct. 2016, Elsevier, [DOI Article link][bibTex]
-Sílvio Moreira and Wallace, Byron C. and Lyu, Hao and Paula Carvalho and Mário J. Silva, odelling Context with User Embeddings for Sarcasm Detection in Social Media, presented at CoNLL - The 20th SIGNLL Conference on Computational Natural Language Learning, Aug. 2016, Association for Computational Linguistics, [bibTex]
-Sílvio Moreira and Ramon Fernandez Astudillo and Wang Ling and Mário J. Silva and Isabel Trancoso, INESC-ID at SemEval-2016 Task 4-A: Reducing the Problem of Out-of-Embedding Words, presented at International Workshop on Semantic Evaluation (SemEval-2016), Jul. 2016, [bibTex]
-Andreia Teixeira and Francisco Fernandes and A. P. Francisco, SpliceTAPyR - Efficient method for transcriptome alignment, presented at MatBio 2016: 1st International Student Conference on the Mathematical Foundations in Bioinformatics, Jul. 2016, [DOI Article link][bibTex]
-Alberto Rodrigues da Silva, RSLingo4Privacy: An Integrated Approach to Improve the Specification and Analysis of Privacy Policies, presented at Proceedings of International Symposium SymOrg’2016, Jun. 2016, [bibTex]
-Alexey Sergeev and José Manuel Nunes Salvador Tribolet, Extended Viable System Model, presented at 6th Enterprise Engineering Working Conference, EEWC 2016, May 2016, Springer International Publishing, Berlin Heidelberg., [DOI Article link][bibTex]
-João Pombinho and Carlos Mendes and Bruno Alexandre Barbosa Fragoso and Ricardo Manuel Simões dos Santos and Nuno Miguel Carvalho da Silva and Elton Pedro Sixpence and José Manuel Nunes Salvador Tribolet, Objectifying Value Co-creation–An Exploratory Study, presented at Sixth Enterprise Engineering Working Conference, EEWC 2016, May 30-June, May 2016, Springer International Publishing, Berlin Heidelberg, [DOI Article link][bibTex]
-João Pedro Marques Pombinho and Carlos Manuel Martins Mendes and Bruno Alexandre Barbosa Fragoso, Objectifying Value Co-creation–An Exploratory Study, presented at Engineering Working Conference, EEWC 20116, Funchal, Madeira, Portugal, May 2016, Springer International Publishing, [DOI Article link][bibTex]
-Cristina Mota and Paula Carvalho and Anabela Barreiro, Port4NooJ v3.0: Integrated Linguistic Resources for Portuguese NLP, presented at Proceedings of the Tenth International Conference on Language Resources and Evaluation (LREC 2016), May 2016, ELRA, [bibTex]
-Carlos Bartolomeu and Angel Manuel Bravo Gestoso and Luis Rodrigues, Dynamic Adaptation of Geo-Replicated CRDTs, presented at The 31st ACM/SIGAPP Symposium on Applied Computing (SAC), Dependable and Adaptive Distributed Systems Track, Apr. 2016, ACM, [bibTex]
-Dragana Aleksić, Dušan Savić, Siniša Vlajić and Alberto Rodrigues da Silva and Vojislav Stanojević, Ilija Antović, Miloš Milić, Generate User Interface Using Xtext Framewor, presented at Proceedings of the International Conference on Information Society and Technology (ICIST 2016), Apr. 2016, [bibTex]
-Alberto Rodrigues da Silva and João Caramujo and Sharareh Moghadam Monfared and Pável Calado and Travis Breaux, Improving the Specification and Analysis of Privacy Policies: The RSLingo4Privacy Approach, presented at Proceedings of ICEIS’2016 Conference, Apr. 2016, SCITEPRESS, [bibTex]
-Bruno Filipe Silva Dias and H. Sofia Pinto and David Martins de Matos, BPMTimeline: JavaScript Tempo Functions and Time Mappings using an Analytical Solution, presented at 2nd Web Audio Conference (WAC), Mar. 2016, Georgia Institute of Technology, [bibTex]
-Hugo Manuel Antunes Lopes and H. Sofia Pinto and A. P. Francisco, Influence and Sentiment Homophily on Twitter Social Circles, presented at Complex Networks VII: Proceedings of the 7th Workshop on Complex Networks CompleNet 2016, Mar. 2016, Springer, [DOI Article link][bibTex]
-Andreia Teixeira and Francisco C. Santos and A. P. Francisco, Spanning edge betweenness in practice, presented at , Mar. 2016, [DOI Article link][bibTex]
-Bruno Filipe Silva Dias and David Martins de Matos and Matthew E.P. Davies and H. Sofia Pinto, Time Stretching & Pitch Shifting with the Web Audio API: Where are we at?, presented at 2nd Web Audio Conference (WAC), Mar. 2016, Georgia Institute of Technology, [bibTex]
-André Filipe Oliveira Pinto Ribeiro and Luis Sousa and Alberto Rodrigues da Silva, Comparative Analysis of Workbenches to Support DSMLs: Discussion with Non-Trivial Model-Driven Development Needs, presented at Proceedings of MODELSWARD’2016, Feb. 2016, SCITEPRESS, [bibTex]
-Paulo Filipe and André Filipe Oliveira Pinto Ribeiro and Alberto Rodrigues da Silva, XIS-CMS: Towards a Model-Driven Approach for Developing Platform-Independent CMS-Specific Modules, presented at Proceedings of MODELSWARD’2016, Feb. 2016, SCITEPRESS, [bibTex]
National Conferences: 2
2016
-Calmenelias Pino Fleitas and Bruno Miguel das Neves Dantas and A. P. Francisco and Cátia Vaz and José Simão, NGSPipes: From Specification to Automatic Deployment of NGS pipelines, presented at Inforum, Sep. 2016, [bibTex]
-Samuel M. Coelho and Miguel Filipe Ribeiro Pais, Smart Places: A framework to develop proximity-based mobile applications, presented at INForum, Sep. 2016, [bibTex]

PhD Theses: 7
2016
-Marzieh Bakhshandeh advised by José Borbinha and Catia Pesquita, Ontology-driven Analysis of Enterprise Architecture Models, PhD Thesis on Instituto Superior Técnico - University of Lisbon, Jul. 2016, [bibTex]
-André Carreiro advised by Sara C. Madeira and Mamede de Carvalho, An integrative mining approach to unravel prognostic markers in neurodegenerative diseases, PhD Thesis on Instituto Superior Técnico, Technical University of Lisbon, Jun. 2016, [bibTex]
-Gonçalo Fernandes Simões advised by Helena Galhardas and Luís Gravano, When Speed Has a Price: Fast Information Extraction Using Approximations, PhD Thesis on Instituto Superior Técnico, Jun. 2016, [bibTex]
-Luis de Sousa advised by Alberto Rodrigues da Silva, DSL3S: Domain Specific Language for Spatial Simulation Scenarios, PhD Thesis on Instituto Superior Técnico da Universidade Técnica de Lisboa, Apr. 2016, [bibTex]
-Andras Hartmann advised by Susana Vinga and J. M. Lemos, Identification of HIV-1 Infection models, PhD Thesis on Instituto Superior Técnico, Universidade Técnica de Lisboa, Jan. 2016, [bibTex]
-David Soares Batista advised by Mário J. Silva, Large-Scale Semantic Relationship Extraction for Information Discovery, PhD Thesis on Instituto Superior Técnico, Universidade de Lisboa, Jan. 2016, [bibTex]
-Rui Miguel Carrasqueiro Henriques advised by Sara C. Madeira, Learning from High-Dimensional Data using Local Descriptive Models, PhD Thesis on , Jan. 2016, [bibTex]
MSc Theses: 15
2016
-Filipe Nuno Marques Pires da Silva advised by Bruno Martins and David Martins de Matos, Computational Detection of Irony in Textual Messages, MSc Thesis on Instituto Superior Técnico, Universidade de Lisboa, Nov. 2016, [bibTex]
-Sofia Baptista Cerqueira Estêvão Modesto advised by Miguel Mira da Silva and Daniel Jorge Viegas Gonçalves, Gamification in Information Systems Development, MSc Thesis on , Nov. 2016, [bibTex]
-Rafael Jorge Barreira advised by Helena Galhardas and Paulo Ferreira, ProntAPP++: Uma aplicação móvel para medicamentos, MSc Thesis on , Nov. 2016, [bibTex]
-Filipe Alexandre Clemente Cardoso advised by Mário J. Silva and Cátia Sofia de Sousa Pinto, Reengineering the eVM Mortality Surveilance Portal: Information Collection, Analysis and Publication, MSc Thesis on Instituto Superior Técnico, Universidade de Lisboa, Nov. 2016, [bibTex]
-Alexey Mazalov advised by Bruno Martins and David Martins de Matos, Understanding Spatial Semantics in Natural Language, MSc Thesis on Instituto Superior Técnico, Universidade de Lisboa, Nov. 2016, [bibTex]
-Cátia Alexandre Bento Almeirão advised by Miguel Mira da Silva and Daniel Jorge Viegas Gonçalves, Gamification in Business Process Management, MSc Thesis on , Oct. 2016, [bibTex]
-Jessica Filipa Assis Alves Ribeiro advised by Miguel Mira da Silva and Daniel Jorge Viegas Gonçalves, Gamification in Enterprise Mobile Applications, MSc Thesis on , Oct. 2016, [bibTex]
-José Jorge Marcos Raposo advised by David Martins de Matos and Bruno Martins, Open Information Extraction in Spoken Dialogue, MSc Thesis on , Oct. 2016, [bibTex]
-Inês Coimbra Sousa Castelo advised by Alberto Rodrigues da Silva, BOAv3/DashVis: Visualization Dashboard applied to Learning Objects Repository, MSc Thesis on IST, Jul. 2016, [bibTex]
-Luís Miguel Monteiro Silva advised by Helena Galhardas and João Damásio, ETL in the Age of Big Data, MSc Thesis on , Jun. 2016, [bibTex]
-João Eduardo dos Reis Peres Seixas advised by Alberto Rodrigues da Silva, The XIS-Web Technology: A Model-Driven Development Approach for Responsive Web Applications, MSc Thesis on , Jun. 2016, [bibTex]
-Afonso Vitorino Mangas Pereira da Silva advised by Alberto Rodrigues da Silva, XIS-Analytics: A Domain Specific Language for Data Analysis, MSc Thesis on IST/UL, Jun. 2016, [bibTex]
-Bruno Martins advised by J. Monteiro, Motor de Algoritmo Genético sobre GPUs, MSc Thesis on Instituto Superior Técnico, May 2016, [bibTex]
-Vasco Pinto Ferreira advised by Bruno Martins and David Martins de Matos, Polinformatics and using textual transcript of parliamentary interventions for profiling Portuguese politicians, MSc Thesis on Instituto Superior Técnico, Universidade de Lisboa, May 2016, [bibTex]
-Ana Rita da Costa Pereira advised by Sara C. Madeira, Predicting conversion from mild cognitive impairment to Alzheimer's Disease using ensemble learning, MSc Thesis on , May 2016, [bibTex]

Technical Reports: 6
2017
-Ana Sara Silva Rodrigues da Costa and José Borbinha and José Rui Figueira, A Multiple Criteria Nominal Classi cation Method Based on the Concepts of Similarity and Dissimilarity, INESC-ID Tec. Rep. 1/2017, Jan. 2017, [bibTex]
2016
-Miguel E. Coimbra and A. P. Francisco and Luís Veiga, Joint Map-Match Modeling of GPS Traces, INESC-ID Tec. Rep. 13/2016, Dec. 2016, [bibTex]
-Miguel E. Coimbra and A. P. Francisco and Luís Veiga, Scalability of Graph Clustering Methods with Distributed Systems, INESC-ID Tec. Rep. 14/2016, Dec. 2016, [bibTex]
-Sérgio Esteves and Helena Galhardas and Luís Veiga, Smart Scheduling of Continuous Data-Intensive Workflows with Machine Learning Triggered Execution, INESC-ID Tec. Rep. 9/2016, Oct. 2016, [bibTex]
-Valéria Magalhães Pequeno and Vânia Maria Ponte Vidal and Tiago Vinuto, Towards Automatic Generation of R2R Mappings, INESC-ID Tec. Rep. 7/2016, Oct. 2016, [bibTex]