Publications

Books

Books: 2

2017

- Arlindo L. Oliveira, Mentes Digitais: A Ciência Redefinindo a Humanidade, book, Nov. 2017, IST Press [bibTex]
- Arlindo L. Oliveira, The Digital Mind: How Science is Redefining Humanity, book, Mar. 2017, MIT Press [bibTex]

Book Chapters: 4

2018

- André Reis and Alberto Rodrigues da Silva, Evaluation of XIS-Reverse, a Model-Driven Reverse Engineering Approach for Legacy Information Systems, chapter of Model-Driven Engineering and Software Development, Jul. 2018, Springer [bibTex]
- Sérgio Guerreiro, Informed Decision-Making with Enterprise Dynamic Systems Control, Systems and Software Engineering, chapter of Encyclopedia of Information Science and Technology, Jan. 2018, IGI Global [bibTex]
- Sérgio Guerreiro, Challenges of Meta Access Control Model Enforcement to an Increased Interoperability, chapter of Encyclopedia of Information Science and Technology, fourth edition, Systems and Software Engineering, Jan. 2018, IGI Global [bibTex]

2017

- Sérgio Guerreiro and Rui Pascoal, Information Overload in augmented reality the outdoor sports environments, chapter of Information and Communication Overload in the Digital Age, Aug. 2017, IGI Global [bibTex]

Articles

International Journal Articles: 31

2019

- Pradeeban Kathiravelu and Ashish Sharma and Helena Galhardas and Peter Van Roy and Luís Veiga, On-demand big data integration, article in Distributed and Parallel Databases vol. 37 (2) pp. 273–295, Jun. 2019, Springer [DOI Article link] [bibTex]
- Tiago de Melo and Altigran S. da Silva and Edleno S. de Moura and Pável Calado, OpinionLink: Leveraging user opinions for product catalog enrichment, article in Information Processing & Management vol. 56 (3) pp. 823–843, May. 2019 [bibTex]
- João Caramujo and Alberto Rodrigues da Silva and Shaghayegh Monfared and André Ribeiro and Travis Breaux and Pável Calado, RSL- IL4Privacy: a domain-specific language for the rigorous specification of privacy policies, article in Requirements Engineering vol. 24 (1) pp. 1--26, May. 2019 [bibTex]
- Luís Borges and Bruno Martins and Pável Calado, Combining similarity features and deep representation learning for stance detection in the context of checking fake news, article in ACM Journal of Data and Information Quality vol. 9 (39), Apr. 2019 [bibTex]
- Rafael Alexandre da Silva Marques and Luís M. S. Russo and Nuno Roma, Flying Tourist Problem: Flight Time and Cost Minimization in Complex Routes, article in Expert Systems with Applications vol. 130 pp. 172 - 187, Apr. 2019, Elsevier [bibTex] [PDF]

2018

- Diogo Miguel Barrinha Barradas and Tiago Brito and David José Nunes Duarte and Nuno Miguel Pereira dos Santos and Luis Rodrigues, Forensic Analysis of Communication Records of Messaging Applications from Physical Memory, article in Computers & Security, to appear on 2018, Elsevier [DOI Article link] [bibTex]
- Andreia Teixeira and Francisco Fernandes and A. P. Francisco, SpliceTAPyR - An Efficient Method For Transcriptome Alignment, article in International Journal of Foundations of Computer Science vol. 29 (8) pp. 1297-1310, Dec. 2018, World Scientific Publishing Co [Article] [DOI Article link] [bibTex] [PDF]
- Diogo Miguel Barrinha Barradas and Tiago Brito and David Duarte and Nuno Santos and Luis Rodrigues, Forensic Analysis of Communication Records of Web-based Messaging Applications from Physical Memory, article in Computer & Security, Oct. 2018, Elsevier [bibTex]
- Nuno D. Mendes and Rui Miguel Carrasqueiro Henriques and Elisabeth Remy and Jorge Carneiro and Pedro T. Monteiro and Claudine Chaouiya, Estimating attractor reachability in asynchronous logical models, article in Frontiers in Physiology vol. 9 pp. 1161, Jul. 2018 [DOI Article link] [bibTex]
- Rui Miguel Carrasqueiro Henriques and Sara C. Madeira, Triclustering Algorithms for Three-Dimensional Data Analysis: A Comprehensive Survey, article in ACM Computing Surveys (CSUR) vol. 51 pp. 1-43, Jun. 2018 [DOI Article link] [bibTex]
- Paulo Jorge Fernandes Carreira and António Aguiar Costa and Vitor Mansur and Artur A. Arsénio, Can HVAC really learn from users? A simulation-based study on the effectiveness of voting for comfort and energy use optimisation, article in Sustainable Cities and Society, May. 2018, Elsevier [Article] [DOI Article link] [bibTex] [PDF]
- Andreia Teixeira and Pedro T. Monteiro and João A. Carriço and Francisco C. Santos and A. P. Francisco, Large-Scale Simulations of Bacterial Populations over Complex Networks, article in Journal of Computational Biology, May. 2018 [bibTex]
- Francisco Miguel Caramelo Duarte and Bruno Martins and Cátia Sousa Pinto and Mário J. Silva, Deep neural models for ICD-10 coding of death certificates and autopsy reports in free-text, article in Journal of Biomedical Informatics vol. 80 pp. 64-77, Apr. 2018, Elsevier [Article] [DOI Article link] [bibTex]
- Luís M. S. Russo and Andreia Teixeira and A. P. Francisco, Linking and Cutting Spanning Trees, article in Algorithms vol. 11 (4) pp. 53, Apr. 2018, MDPI [DOI Article link] [bibTex]
- Miguel Monteiro and Ana Catarina Fonseca and Ana T. Freitas and Teresa Pinho e Melo and A. P. Francisco and José M. Ferro and Arlindo L. Oliveira, Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients, article in ACM/IEEE Transactions cn Computational Biology and Bioinformatics vol. 15 (6) pp. 1953-1959, Mar. 2018 [DOI Article link] [bibTex] [PDF]
- João Carriço and Maxime Crochemore and A. P. Francisco and Solon Pissis and Bruno Ribeiro‑Gonçalves and Cátia Vaz, Fast phylogenetic inference from typing data, article in Algorithms for Molecular Biology vol. 13 (4), Feb. 2018, BioMed Central [DOI Article link] [bibTex]
- Luís Moreira de Sousa and Alberto Rodrigues da Silva, Usability Evaluation of the Domain Specific Language for Spatial Simulation Scenarios, article in Cogent Engineering vol. 5 (1), Feb. 2018, Cogent [DOI Article link] [bibTex]
- Sérgio Guerreiro, Using Markov Theory to Deliver Informed Decisions in Partially Observable Business Processes Operation, article in International Journal of Operations Research and Information Systems (IJORIS) vol. 9 (2) pp. 53--72, Jan. 2018, IGI Global [DOI Article link] [bibTex]

2017

- Miguel bastos Alves and Paulo Jorge Fernandes Carreira and António A. Costa, BIMSL: A Generic Approach to the Integration of Building Information Models with Real-time Sensor Data, article in Automation in Construction, to appear on 2017, Elsevier [bibTex] [PDF]
- Henrique Ramalho Monteiro Latourrette Pombeiro and Rodolfo André Henriques dos Santos and Paulo Jorge Fernandes Carreira and Carlos Silva and João M. C. Sousa, Comparative assessment of low-complexity models to predict electricity consumption in an institutional building: Linear regression vs. fuzzy modeling vs. neural networks , article in Energy and Buildings vol. 146 pp. 141--151, to appear on 2017, Elsevier [DOI Article link] [bibTex]
- Paulo Jorge Fernandes Carreira and Gonçalo Mendes and Bruno Fontes Barroca and Vasco Amaral and Samuli Honkapuro and Rui Prada, Energy behaviour engagement in smart urban environments, article in Energy Procedia vol. 142 pp. 2080-2088, Dec. 2017, Elsevier [Article] [DOI Article link] [bibTex]
- Paulo Jorge Fernandes Carreira and Alfredo Ferreira and Cláudia RIbeiro and Cristina C. Gomes and António A. Costa, Virtual Reality as Integration Environments for Facilities Management: Application and Users Perception, article in Engineering, Construction and Architectural Management Journal, to appear on 2017 [bibTex]
- Rui Miguel Carrasqueiro Henriques and Sara C. Madeira, BSig: Evaluating the Statistical Significance of Biclustering Solutions, article in Data Mining and Knowledge Discovery vol. 32 (1) pp. 124–161, Oct. 2017, Springer [DOI Article link] [bibTex]
- Rui Santos and Patricia Murrieta-Flores and Pável Calado and Bruno Martins, Toponym Matching through Deep Neural Networks, article in International Journal of Geographical Information Science vol. 32 (2) pp. 324--348, Oct. 2017 [Article] [DOI Article link] [bibTex]
- Miguel Costa and Daniel Gomes and Mário J. Silva, The evolution of web archiving, article in International Journal on Digital Libraries vol. 18 (18) pp. 191-205, Sep. 2017, Springer [Article] [DOI Article link] [bibTex]
- Maria Raimundo and Susana Santos and Joana Mendonça and Ana T. Freitas, Are You Eating Right? Ask Your Genes: Developing a Value Proposition in Nutrigenetics, article in Annals of Nutrition and Metabolism vol. 71 pp. 38, Jul. 2017 [DOI Article link] [bibTex]
- Jorge dos Santos Oliveira and Wydemberg J. Araújo and Ricardo M. Figueiredo and Rita C. B. Silva-Portela and Alaine de Brito Guerra and Sinara Carla da Silva Araújo and Carolina Minnicelli and Aline Cardoso Carlos and Ana Tereza Ribeiro de Vasconcelos and Ana T. Freitas and Lucymara F. Agnez-Lima, Biogeographical distribution analysis of hydrocarbon degrading and biosurfactant producing genes suggests that near equatorial biomes have higher abundance of genes with potential for bioremediation, article in BMC Microbiology vol. 17 pp. 168, Jul. 2017, Biomed Central [DOI Article link] [bibTex]
- André Menolli and H. Sofia Pinto and Sheila Reinehr and Andreia Malucelli, SECOL: a semantic environment based on social media to support organisational learning, article in Behaviour \& Information Technology vol. 36 (4) pp. 364-389, Jun. 2017, Taylor&Francis [DOI Article link] [bibTex]
- Daniel H. Dalip and Marcos André Gonçalves and Marco Cristo and Pável Calado, A General Multiview Framework for Assessing the Quality of Collaboratively Created Content on Web 2.0, article in Journal of the American Society for Information Science and Technology vol. 68 (2) pp. 286--308, Feb. 2017 [DOI Article link] [bibTex]
- Rui Miguel Carrasqueiro Henriques and Francisco Luis Sarreira Lourenço Ferreira and Sara C. Madeira, BicPAMS: software for biological data analysis with pattern-based biclustering, article in BMC Bioinformatics vol. 18 (82), Feb. 2017 [DOI Article link] [bibTex]
- Thiago Elias and Icaro Pinto and Luciano Costa and Paulo Carvalho and Daniel Omote and Ihosvany Camps and Tati Ishikawa and Helen Arcuri and Susana Vinga and Arlindo L. Oliveira and Walter Junior and Nelson Silveira, Computational Approach to the Discovery of Phytochemical Molecules with Therapeutic Potential Targets to the PKCZ protein, article in Letters in Drug Design & Discovery vol. 14 pp. 1-12, Jan. 2017, Bentham Science [DOI Article link] [bibTex] [PDF]

International Conferences: 58

2019

- Rui Miguel Carrasqueiro Henriques and Anna Carolina Nametala Finamore do Couto and Marco Antonio Casanova, On the Discovery of Educational Patterns using Biclustering, presented at 15th International Conference on Intelligent Tutoring Systems (ITS), May. 2019 [bibTex]
- Anna Carolina Nametala Finamore do Couto and Marco Antonio Casanova, On the Discovery of Educational Patterns using Biclustering, presented at 15th International Conference on Intelligent Tutoring Systems (ITS), May. 2019 [bibTex]
- Tiago de Melo and Altigran S. da Silva and Edleno S. de Moura and Pável Calado, The importance of canonical product attributes on user opinions: an empirical investigation, presented at 10th Latin American Web Congress (LA-WEB 2019), May. 2019 [bibTex]

2018

- Sérgio Esteves and Helena Galhardas and Luís Veiga, Adaptive Execution of Continuous and Data-intensive Workflows with Machine Learning, presented at Middleware, Dec. 2018 [bibTex]
- Miguel Monteiro and Mário A. T. Figueiredo and Arlindo L. Oliveira, Conditional Random Fields as Recurrent Neural Networks for 3D Medical Imaging Segmentation, presented at Medical Imaging meets NeurIPS Workshop, Dec. 2018 [bibTex] [PDF]
- Danielle Caled and Mário J. Silva, FTR-18: Collecting rumours on football transfer news, presented at 2nd International Workshop on Rumours and Deception in Social Media (RDSM), Nov. 2018 [bibTex] [PDF]
- Pedro Miguel Cecílio Lopes and Alberto Rodrigues da Silva, A Collaborative Platform for Better Managing Technical Documentation: An analysis from a Requirements Engineering Perspective, presented at QUATIC’2018, Sep. 2018 [bibTex]
- Rui Policarpo Duarte and Rui Miguel Carrasqueiro Henriques and Horácio C. Neto, FPGA-based OpenCL Accelerator for Discovering Temporal Patterns in Gene Expression Data Using Biclustering', presented at PBio 2018 Proceedings of the 6th International Workshop on Parallelism in Bioinformatics , Sep. 2018 [DOI Article link] [bibTex]
- Camille Chanial and Rédouane Dziri and Helena Galhardas and Julien Leblay and Minh-Huong Le Nguyen and Ioana Manolescu, ConnectionLens: Finding Connections Across Heterogeneous Data Sources (demo), presented at International Conference on Very Large Databases (VLDB), Aug. 2018 [bibTex]
- Luís Carlos Pissarra Gonçalves and Alberto Rodrigues da Silva, Towards a Catalogue of Reusable Security Requirements, Risks and Vulnerabilities, presented at International Conference on Information Systems Development (ISD'2018), Aug. 2018 [bibTex]
- Luís Carlos Pissarra Gonçalves and Alberto Rodrigues da Silva, A Catalogue of Reusable Security Concerns: Focus on Privacy Threats, presented at IEEE Conference on Business Informatics'2018, Jul. 2018 [bibTex]
- Hugo Rosa and Joao P. Carvalho and Pável Calado and Bruno Martins and Luísa Coheur and Ricardo Ribeiro, Using Fuzzy Fingerprints for Cyberbullying Detection in Social Networks, presented at 2018 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE), Jul. 2018 [bibTex] [PDF]
- Sérgio Guerreiro and Miguens, J., Mira da Silva, M., A Viewpoint for Representing Costs in Enterprise Architectures, presented at 20th IEEE Conference on Business Informatics, Jun. 2018 [bibTex]
- Nuno Freire and Bruno Martins and Pável Calado, Availability of cultural heritage structured metadata in the world wide web, presented at 22nd International Conference on Electronic Publishing, Jun. 2018 [bibTex]
- Sérgio Guerreiro and Silva, D., Sousa, P., Conceptualizing DEMO business transactions with Blockchain Hyperledger Composer to enable Traceability and Control, presented at EEWC, Jun. 2018 [bibTex]
- Rui Miguel Carrasqueiro Henriques and Sara C. Madeira, Order-preserving Pattern Matching Indeterminate Strings, presented at Symposium on Combinatorial Pattern Matching (CPM), Jun. 2018 [bibTex]
- Sandra Lagarto and Anabela Delgado and Rui Silva and Lufialuiso Sampaio and Mário J. Silva and Pável Calado, Record linkage methods for administrative data: The portuguese census transformation program, presented at 2018 European Conference on Quality in Official Statistics, Jun. 2018 [bibTex]
- André Carvalho and Pável Calado and Joao P. Carvalho, Tag-Based User Fuzzy Fingerprints for Recommender Systems, presented at IPMU2018 - 17th International Conference on Information Processing and Management of Uncertainty in Knowledge-Based Systems, Jun. 2018 [bibTex] [PDF]
- João Manuel Policarpo Moreira and Helena Galhardas and Miguel Pardal, LeanBench: comparing software stacks for batch and query processing of IoT data, presented at International Conference on Ambient Systems, Networks and Technologies (ANT), May. 2018 [bibTex]
- Alberto Rodrigues da Silva and João Pedro Nunes da Costa Fernandes, Semiautomated Approach to the Specification and Resolution of Variability in Textual Requirements, presented at ICEIS'2018, Apr. 2018 [bibTex]
- Mário António Fernandes and Alberto Rodrigues da Silva and António José da Costa Gonçalves, Specification of Personal Data Protection Requirements: Interpretation of Legal Requirements from the GDPR, presented at ICEIS'2018, Apr. 2018 [bibTex]
- Alberto Rodrigues da Silva and Ana C. R. Paiva and Valter Emanuel R. da Silva, Towards a Test Specification Language for Information Systems: Focus on Data Entity and State Machine Tests, presented at MODELSWARD’2018, Feb. 2018 [bibTex]

2017

- T. Goosen and Nuno Miguel Antunes Freire and C. Neudecker and M. Eskevich, Bringing Europeana and CLARIN together: Dissemination and exploitation of cultural heritage data in a research infrastructure, presented at Digital Infrastructures for Research 2017, Dec. 2017 [bibTex]
- P. Dugenie and Nuno Miguel Antunes Freire and D. Broeder, Building new knowledge from distributed scientific corpus: HERBADROP & EUROPEANA: Two concrete case studies for exploring big archival data, presented at 2017 IEEE International Conference on Big Data (Big Data), 2017, Dec. 2017 [DOI Article link] [bibTex]
- Nuno Miguel Antunes Freire and R. Wallis and A. Isaac and V. Charles and Hugo Miguel Álvaro Manguinhas, Perspectives on using Schema.org for publishing and harvesting metadata at Europeana’ , presented at SWIB17 Semantic Web in Libraries Conference, Dec. 2017 [bibTex]
- Gu'edria, W., van Kervel, S., Lagerstrom, R. and Sérgio Guerreiro, A Meta Model for Interoperability of Secure Business Transactions - Using BlockChain and DEMO, presented at Proceedings of the 9th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management (KEOD), Nov. 2017 [DOI Article link] [bibTex]
- Sérgio Guerreiro and Guédria, W., Dynamic Behavior Control of Interoperability: An Ontological Approach, presented at Proceedings of the 9th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management, Nov. 2017 [DOI Article link] [bibTex]
- Miguel E. Coimbra and Mennan Selimi and A. P. Francisco and Felix Freitag and Luís Veiga, Gelly-Scheduling: Distributed Graph Processing for Service Placement in Community Networks, presented at 33rd ACM/SIGAPP Symposium On Applied Computing (SAC 2018), Nov. 2017 [bibTex]
- V. Charles and J. Stiller and P. Király and W. Bailer and Nuno Miguel Antunes Freire, Data Quality Assessment in Europeana: Metrics for Multilinguality, presented at International Conference on Theory and Practice of Digital Libraries 2017, Sep. 2017 [bibTex]
- André Carvalho and Pável Calado and Joao P. Carvalho, Fuzzy Fingerprints for Item-Based Collaborative Filtering, presented at 10th Conference of the European Society for Fuzzy Logic and Technology - EUSFLAT2017, Sep. 2017 [bibTex]
- Nuno Miguel Antunes Freire and G. Robson and J. B. Howard and Hugo Miguel Álvaro Manguinhas and A. Isaac, Metadata Aggregation: Assessing the Application of IIIF and Sitemaps Within Cultural Heritage, presented at International Conference on Theory and Practice of Digital Libraries 2017, Sep. 2017 [bibTex]
- Andreia Teixeira and Pedro T. Monteiro and João Carriço and Francisco C. Santos and A. P. Francisco, Using Spark and GraphX to Parallelize Large-Scale Simulations of Bacterial Populations over Host Contact Networks, presented at International Conference on Algorithms and Architectures for Parallel Processing (ICA3PP'17), Sep. 2017 [DOI Article link] [bibTex]
- Alberto Rodrigues da Silva and João Pedro Nunes da Costa Fernandes and Sofia Azevedo, Variability Aspects at a Textual Requirements Specification Level, presented at IEEE 25th International Requirements Engineering Conference Workshops, Sep. 2017 [bibTex]
- Francisco Miguel Caramelo Duarte and Bruno Martins and Cátia Sousa Pinto and Mário J. Silva, A Deep Learning Method for ICD-10 Coding of Free-Text Death Certificates, presented at EPIA 2017: Progress in Artificial Intelligence, Aug. 2017 [DOI Article link] [bibTex]
- Miguel Monteiro and Ana Catarina Fonseca and Ana T. Freitas and Teresa Pinho e Melo and A. P. Francisco and Jose M Ferro and Arlindo L. Oliveira, Improving the Prediction of Functional Outcome in Ischemic Stroke Patients, presented at BIOKDD 2017, Aug. 2017 [bibTex] [PDF]
- Bruno Miguel das Neves Dantas and Calmenelias Pino Fleitas and Alexandre Teixeira de Almeida and João Nuno Gonçalves Forja and A. P. Francisco and José Simão and Cátia Vaz, NGSPipes: Fostering Reproducibility and Scalability in Biosciences, presented at 8th International Conference on Bioinformatics, Computational Biology, and Health Informatics, Aug. 2017 [bibTex]
- Pradeeban Kathiravelu and Yiru Chen and Ashish Sharma and Helena Galhardas and Peter Van Roy and Luís Veiga, On-Demand Service-Based Big Data Integration: Optimized for Research Collaboration, presented at VLDB Workshop on Data Management and Analytics for Medicine and Healthcare (DMAH), Aug. 2017 [bibTex] [PDF]
- Maxime Crochemore and A. P. Francisco and Solon P. Pissis and Cátia Vaz, Towards distance-based phylogenetic inference in average-case linear-time, presented at WABI, Aug. 2017 [DOI Article link] [bibTex]
- Nuno F. Lages and Bernardo Silva Caetano and Manuel J Fonseca and João Carlos Serrenho Dias Pereira and Helena Galhardas and Rui Farinha, Umedicine: A System for Clinical Practice Support and Data Analysis, presented at VLDB Workshop on Data Management and Analytics for Medicine and Healthcare (DMAH), Aug. 2017 [bibTex]
- André Carvalho and Pável Calado and Joao P. Carvalho, Combining Ratings and Item Descriptions in Recommendation Systems
using Fuzzy Fingerprints, presented at FUZZ-IEEE, 2017 IEEE International Conference on Fuzzy Systems, Jul. 2017 [bibTex]
- Diogo Miguel Barrinha Barradas and Tiago Brito and David Duarte and Nuno Santos and Luis Rodrigues, Forensic Analysis of Communication Records of Web-based MessagingApplications from Physical Memory., presented at The 14th International Conference on Security and Cryptography, Jul. 2017 [bibTex]
- Alberto Rodrigues da Silva, Linguistic Patterns and Linguistic Styles for Requirements Specification (I): An Application Case with the Rigorous RSL/Business-Level Language, presented at EuroPLOP’2017, Jul. 2017 [bibTex]
- Sérgio Guerreiro, Locating and visualizing the most valuable business processes states in large control policy graphs produced by POMDP, presented at 19th IEEE Conference on Business Informatics (CBI), Jul. 2017 [DOI Article link] [bibTex]
- Luis Pedro Coelho and Paulo Monteiro and Renato Alves and Ana T. Freitas and Peer Bork, NGLESS: A tool for perfectly understandable and reproducible metagenomics pipelines based on a domain-specific language, presented at ISMB BOSC 2017, Jul. 2017 [bibTex]
- Andreia Teixeira and Pedro T. Monteiro and João Carriço and Francisco C. Santos and A. P. Francisco, Using Spark and MapReduce to Parallelize Large Scale Simulations Over Host Contact Networks, Jul. 2017 [bibTex]
- Joana Borges Teixeira and H. Sofia Pinto, Cross-Domain Analogy: From Image to Music, presented at 5th International Workshop on Musical Metacreation, Jun. 2017 [bibTex]
- Sérgio Guerreiro and Br'as, J., DEMO Business Processes Design to Improve the Enterprise Business Continuity Plans, presented at Advances in Enterprise Engineering XI. EEWC 2017, Jun. 2017 [DOI Article link] [bibTex]
- Sérgio Guerreiro, Designing a Decision-Making Process for Partially Observable Environments Using Markov Theory, presented at Enterprise, Business-Process and Information Systems Modeling, Jun. 2017 [DOI Article link] [bibTex]
- Nuno Miguel Antunes Freire and Hugo Miguel Álvaro Manguinhas and A. Isaac and G. Robson and J. B. Howard, Web technologies: a survey of their applicability to metadata aggregation in cultural heritage, presented at 21st International Conference on Electronic Publishing, Jun. 2017 [bibTex]
- Rui Abreu and Alexandre Perez, A test-suite diagnosability metric for spectrum-based fault localization approaches, presented at Proceedings of the 39th International Conference on Software Engineering (ICSE), May. 2017 [bibTex]
- Paulo Jorge Fernandes Carreira and Anatolijs Zabasta and Oksana Nikiforova and Nadezda Kunicina and Uldis Sukovskis and Leonids Ribickis and Vasco Amaral and Paulo Carreira and Miguel Goulão, Developing a Mutually-Recognized Cross-Domain Study Program in Cyber-Physical Systems , presented at 8th IEEE Global Engineering Education Conference (EDUCON 2017), May. 2017 [DOI Article link] [bibTex]
- Rui Abreu and Spencer Pearson and Jose Campos and Gordon Fraser and Michael D Ernst and Deric Pang and Benjamin Keller, Evaluating & improving fault localization techniques, presented at Proceedings of the 39th International Conference on Software Engineering (ICSE), May. 2017 [bibTex]
- Rui Abreu and Luís Cruz, Leafactor: Improving energy efficiency of android apps via automatic refactoring, presented at 2017 IEEE/ACM 4th International Conference on Mobile Software Engineering and Systems (MOBILESoft), May. 2017 [bibTex]
- Rui Abreu and Luís Cruz, Performance-based guidelines for energy efficient mobile applications, presented at 2017 IEEE/ACM 4th International Conference on Mobile Software Engineering and Systems (MOBILESoft), May. 2017 [bibTex]
- Rui Abreu and Alexandre Perez and Marcelo D'Amorim, Prevalence of single-fault fixes and its impact on fault localization, presented at IEEE International Conference on Software Testing, Verification and Validation (ICST), Apr. 2017 [bibTex]
- André Filipe Oliveira Pinto Ribeiro and Alberto Rodrigues da Silva, RSLingo4Privacy Studio: A Tool to Improve the Specification and Analysis of Privacy Policies, presented at ICEIS'2017, Apr. 2017 [bibTex]
- Andreia Teixeira and Francisco C. Santos and A. P. Francisco, Emergence of social balance in signed networks, presented at CompleNet 2017, Mar. 2017 [DOI Article link] [bibTex]
- André Reis and Alberto Rodrigues da Silva, XIS-Reverse: A Model-Driven Reverse Engineering Approach for Legacy Information Systems, presented at MODELSWARD’2017, Jan. 2017 [bibTex]

National Conferences: 3

2018

- Maria João Albuquerque and H. Sofia Pinto and José Borbinha, A Heterogeneidade na Representação da Informação Musical : Proposta de uma Ontologia para a Música, presented at 13º Congresso BAD, Oct. 2018 [bibTex]
- Ambrósio Alves Soares and Paula Cristina Negrão Ventura Martins and Alberto Rodrigues da Silva, Revisão Sistemática da Literatura sobre Ontologias Legais, presented at Conferência da Associação Portuguesa de Sistemas de Informação (CAPSI'2018), Sep. 2018 [bibTex]

2017

- José Borbinha and Adelino Canário, ELIXIR Portugal: Platforms, Use Cases and Services, presented at Bioinformatics Open Day, Feb. 2017 [bibTex]

National Journal Articles: 1

2017

- José Manuel Nunes Salvador Tribolet and Paulo Ferreira and Miguel Correia and Carlos Nuno da Cruz Ribeiro and Pedro Adão and Nelson Escravana., Cybersecurity: the role of informatics engineering, article in Revista da Ordem dos Engenheiros, May. 2017 [Article] [bibTex]

Dissertations

PhD Theses: 3

2018

- Baojiang Yang advised by Mário J. Silva, Essays in telecomunnication policy, PhD Thesis, May. 2018 [bibTex]
- Jorge dos Santos Oliveira and Ana T. Freitas and Lucymara Agnez-Lima advised by Ana T. Freitas and Lucymara Agnez-Lima, Prospecção de genes aplicados à biodegradação de hidrocarbonetos e produção de surfactantes utilizando abordagens computacionais, PhD Thesis at Universidade Federal do Rio Grande do Norte - Brasil, Apr. 2018 [bibTex]
- Silvio Moreira advised by Mário J. Silva and Paula Carvalho, Agile Social Media Analysis with Neural Networks, PhD Thesis at IST, Jan. 2018 [bibTex] [PDF]

MSc Theses: 36

2018

- Fernando Liça advised by Pável Calado, Census Optimization Using Machine Learning Techniques, MSc Thesis, Dec. 2018 [bibTex]
- Filipe Santos Nobre da Costa advised by Helena Galhardas and João Carlos Serrenho Dias Pereira, Physician-friendly predictive model: application to vasopressors administration and mechanical ventilation prediction, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Dec. 2018 [bibTex]
- Ricardo José Ribeiro Pereira advised by Pável Calado, “Big data meets nature conservation”: Ferramentas automáticas para extracção de informação relevante para a conservação da biodiversidade, MSc Thesis, Dec. 2018 [bibTex]
- Magda Carolina Araújo Resende advised by Helena Galhardas and Inês Lynce, DeepSea: Web-based database, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Nov. 2018 [bibTex]
- Fernando Jorge Vicente Marçal Liça advised by Pável Calado and Mário J. Silva, Census Optimization Using Machine Learning Techniques, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2018 [bibTex]
- Sebastião Salema Cordeiro Aboim de Barros advised by Mário J. Silva and Francisca Leite, Conformance Checking for Care Pathway Compliance Assessment, MSc Thesis, Oct. 2018 [bibTex]
- Henrique da Nave Cândido Ferrão Carlos advised by H. Sofia Pinto and Francisco S. Melo, Creating Recipes using Machine Learning and Computational Creativity , MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2018 [bibTex]
- Rafael Alexandre Pires de Miranda advised by Bruno Martins and Mário J. Silva, Deep Learning for Multi-Label ICD-10 Classification of Hospital Discharge Summaries, MSc Thesis, Oct. 2018 [bibTex]
- Filipe Flores Monteiro advised by Bruno Martins and Mário J. Silva, Predicting Restaurant Inspection Scores Based on Yelp Data and Sanitary Inspection Reports, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2018 [bibTex]
- Miguel Felicio Raposo Vieira advised by Mário J. Silva and Bruno Martins, EpiMass: A Clinical and Epidemiological Platform for Mass Gatherings, MSc Thesis, Jun. 2018 [bibTex]
- André Ricardo Anselmo Félix advised by Luísa Coheur and Pável Calado, Watson contra o Mundo, MSc Thesis, Jun. 2018 [bibTex]
- Jorge Simão Madeira Cordeiro de Aragão Goulart advised by Helena Galhardas and João Carlos Serrenho Dias Pereira, Sistema de Gestão de Informação do IPFN: Gestão de Recursos Humanos e Suporte Informático, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Apr. 2018 [bibTex]

2017

- João Gonçalo Nunes Vicente Marques Ceia advised by H. Sofia Pinto, Questionaire System for Human Resources , MSc Thesis, Dec. 2017 [bibTex]
- Cátia Borges Ormonde advised by Helena Galhardas and Antónia Lopes, CLEENEX: Iterative Data Cleaning with User Intervention, MSc Thesis at Instituto Superior Técnico, Univ. de Lisboa, Nov. 2017 [bibTex]
- João Manuel Policarpo Moreira advised by Miguel Pardal and Helena Galhardas, Comparing software stacks for Big Data batch processing, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2017 [bibTex]
- Daiane Pereira de Oliveira advised by Alberto Rodrigues da Silva, dDocs/Dashboards: Data Analytics for a Citizen-Centric Platform, MSc Thesis at IST-UL, Nov. 2017 [bibTex]
- Lufialuiso Sampaio Velho advised by Mário J. Silva and Pável Calado, Emparelhamento de Dados Censitários, MSc Thesis, Nov. 2017 [bibTex] [PDF]
- Carolina Sofia Lisboa Sequeira advised by Alberto Rodrigues da Silva, Especificação rigorosa de requisitos de usabilidade para software, MSc Thesis at IST-UL, Nov. 2017 [bibTex]
- Mauro Domingues Teles advised by Bruno Martins and David Martins de Matos, Geocodificação e Datação Automática de Obras Musicais com, Base no Conteúdo Áudio, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2017 [bibTex]
- Pedro Miguel Cecílio Lopes advised by Alberto Rodrigues da Silva, ITBox: A Collaborative Platform for Better Managing Technical Documentation, MSc Thesis, Nov. 2017 [bibTex]
- Rui Menezes da Silva advised by Mário J. Silva and Pável Calado, Matching Census Data Records, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2017 [bibTex] [PDF]
- João Francisco Vieira Gonçalves advised by Alberto Rodrigues da Silva, ProjectLingo: Rigorous Specification of Project Plans, MSc Thesis at IST-UL, Nov. 2017 [bibTex]
- Miguel Pedro da Custódia Conceição advised by Alberto Rodrigues da Silva, RSLingo-Studio: A Tool for Rigorous Requirements Specification, Validation and Transformation, MSc Thesis at IST-UL, Nov. 2017 [bibTex]
- Barbara Luis Sequeira de Pinho advised by Mário J. Silva and Bruno Martins, Sleep Desorders Clinical Database, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2017 [bibTex] [PDF]
- Tiago André Ferreira Castanheira advised by Mário J. Silva and Bruno Martins, Sleep Desorders Clinical Database, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2017 [bibTex] [PDF]
- André Domingues advised by Daniel Simões Lopes and Joaquim Armando Pires Jorge, André Filipe Pinto Domingues , MSc Thesis at Universidade de Lisboa, Oct. 2017 [bibTex]
- Francisco Ribeiro Duarte advised by Mário J. Silva and Bruno Martins, Automated Classification of Causes of Mortality, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Oct. 2017 [bibTex]
- Carlos Ribeiro advised by Paolo Romano and Bruno Martins, Scalable and Memory-Efficient Approaches for Spatial Data Downscaling Leveraging Machine Learning, MSc Thesis at Ist, Lisbon University , Oct. 2017 [bibTex]
- Diogo Lima Nicolau advised by Pável Calado, Construção de Vizinhanças através da Popularidade de Itens em Métodos Colaborativos, MSc Thesis at Instituto Superior Técnico, Sep. 2017 [bibTex]
- Diogo Filipe Pimenta Andrade advised by Mário J. Silva and Bruno Martins, A Prototype Infrastructure for Sentinel Earth Observation Data Relative to Portugal, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jun. 2017 [bibTex] [PDF]
- Joana Borges Teixeira advised by H. Sofia Pinto, Cross-Domain Analogy: From Image to Music, MSc Thesis, May. 2017 [bibTex]
- Nuno Filipe Gonçalves das Lages advised by Helena Galhardas and João Carlos Serrenho Dias Pereira, Umedicine: A System for Clinical Practice Support and Data Analysis, MSc Thesis, May. 2017 [bibTex]
- Miguel Neves Neto advised by Helena Galhardas and João Carlos Serrenho Dias Pereira, Umedicine: Medical Data Visualization Module, MSc Thesis, May. 2017 [bibTex]
- André Reis advised by Alberto Rodrigues da Silva, XIS-Reverse: A Model-Driven Reverse Engineering Approach, MSc Thesis at IST-UL, May. 2017 [bibTex]
- Margarida Filipa Leal Correia advised by H. Sofia Pinto, Fashion Recommender System (only project), MSc Thesis, Feb. 2017 [bibTex]

Internships: 1

2018

- João Francisco Lopes Pirralha advised by Helena Galhardas, U Medicine, short term traineeship, May. 2018 [bibTex]

as Editors

Edited Proceedings: 2

2019

- Melanie Herschel and Helena Galhardas and Berthold Reinwald and Irini Fundulaki and Carsten Binnig and Zoi Kaoudi and Zoi Kaoudi, editors, Advances in Database Technology - 22nd International Conference on Extending Database Technology (EDBT 2019), Mar. 2019, OpenProceedings.org [bibTex]

2018

- Sérgio Guerreiro and Gulden, J., Reinhartz-Berger, I., Schmidt, R., Guédria, W., Bera, P., editors, Enterprise, Business-Process and Information Systems Modeling, LNBIP 318, Jun. 2018, Springer Verlag [bibTex]

Reports

Technical Reports: 7

2019

2018

- Ana Sara Silva Rodrigues da Costa and Salvatore Corrente and Salvatore Greco and José Rui Figueira and José Borbinha, A robust hierarchical nominal classification method based on similarity and dissimilarity, INESC-ID Tec. Rep. 5/2018, Nov. 2018 [bibTex] [PDF]
- Pradeeban Kathiravelu and Ashish Sharma and Helena Galhardas and Peter Van Roy and Luís Veiga, On-Demand Big Data Integration: A Hybrid ETL Approach for Reproducible Scientific Research, INESC-ID Tec. Rep. 3/2018, Apr. 2018 [bibTex]
- Nuno Miguel Antunes Freire and Valentine Charles and Antoine Isaac, Evaluation of Schema.org for Aggregation of Cultural Heritage Metadata, INESC-ID Tec. Rep. 1/2018, Jan. 2018 [bibTex] [PDF]

2017

- Ana Sara Silva Rodrigues da Costa and José Rui Figueira and José Borbinha, A Multiple Criteria Nominal Classification Method Based on the Concepts of Similarity and Dissimilarity, INESC-ID Tec. Rep. 7/2017, Aug. 2017 [bibTex] [PDF]
- Miguel E. Coimbra and A. P. Francisco and Luís Veiga, Gelly-Scheduling: Distributed Graph Processing for Network Service Placement, INESC-ID Tec. Rep. 4/2017, Feb. 2017 [bibTex]
- Ana Sara Silva Rodrigues da Costa and José Borbinha and José Rui Figueira, A Multiple Criteria Nominal Classification Method Based on the Concepts of Similarity and Dissimilarity, INESC-ID Tec. Rep. 1/2017, Jan. 2017 [bibTex] [PDF]