Dotted Suffix Trees : A Structure for Approximate Text Indexing
Luis Coelho,
R – INESC-ID Lisboa –
Abstract:
The problem we address is text indexing for approximate matching. We consider that we are given a text T which undergoes some preprocessing to generate an index. We can later query this index to identify the places where a string occurs up to a certain number of allowed substitutions k. We present a structure for indexing which occupies space O(n log^k n) in the average case, independent of alphabet size, n being the text size. This structure support searching in O(m^{k+1}) time, for patterns of size m, again independent of alphabet size. The construction of the structure has time bound by O(kN|S|), where N is the number of nodes in the index and |S| the alphabet size.
Date: 2005-Nov-18 Time: 14:30:00 Room: 336
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