Publications
Filter Publications: 2021 - 2023
Books
Books: 1
2022
- Enterprise Architecture and Cartography. From practice to theory; from representation to design, book, Nov. 2022, Springer [bibTex]
, Book Chapters: 6
2022
- Business Process Design, chapter of Enterprise Architecture and Cartography: From Practice to Theory; From Representation to Design, to appear on 2022, Springer International Publishing [bibTex]
, - Towards Trustworthy Artificial Intelligent Systems, chapter of COVID-19 Contact Tracing Applications in Portugal: Effectiveness and Privacy Issues, Sep. 2022, Springer [bibTex]
, 2021
- Political Opinions on the Past Web, chapter of In The Past Web, to appear on 2021, Springer [bibTex]
, - Legislative Debates in the Portuguese Assembleia da República, chapter of In The Politics of Legislative Debates, to appear on 2021, Oxford University Press [bibTex]
, - Towards Conscious Enterprises: The Role of Enterprise Engineering in Realizing Living Sciences Paradigms into Management Sciences, chapter of Engineering the Transformation of the Enterprise, Sep. 2021, Springer [bibTex]
, - Artificial Intelligence Applications in Stroke, chapter of Precision Medicine in Stroke, May. 2021, Springer Nature [bibTex]
, Articles
International Journal Articles: 83
2023
- Learning the dynamics of realistic models of C. elegans nervous system with recurrent neural networks, article in Scientific Reports, Jan. 2023, Springer Nature [bibTex] [PDF]
, 2022
- A supervised learning model for medical appointments no-show management, article in International Journal of Medical Engineering and Informatics vol. 14 (1) pp. 90-104, to appear on 2022, Inderscience Enterprises Ltd. [DOI Article link] [bibTex] [Video]
, - A Survey on Blockchain Interoperability: Past, Present, and Future Trends, article in ACM Computing Surveys, to appear on 2022, ACM [bibTex]
, - A Survey on Business Process View Integration: Past, Present, and Future Applications to Blockchain, article in Business Process Management Journal, to appear on 2022, World Scienti c Publishing Company [bibTex]
, - Assessing Robustness in Multimodal Transportation Systems: A case study in Lisbon, article in European Transport Research Review, to appear on 2022 [bibTex]
, - Cache-Oblivious Hilbert Curve based Blocking-Scheme for Matrix Transposition, article in Transactions on Mathematical Software, to appear on 2022, ACM [DOI Article link] [bibTex]
, - Cooperative Decision-Making to Minimize Biased Perceived Value Effect on Business Process Decisions Using Partially Observable Markov Decision Processes, article in Operations Research Forum vol. 3 (2) pp. 1-26, to appear on 2022, Springer International Publishing [bibTex]
, - Development of deep learning segmentation models for coronary X-ray angiography: Quality assessment by a new global segmentation score and comparison with human performance, article in Revista Portuguesa de Cardiologia vol. 41 (12) pp. 1011-1021, Dec. 2022, Elsevier [Article] [DOI Article link] [bibTex]
, - DISA tool: discriminative and informative subspace assessment with categorical and numerical outcomes, article in PLOS ONE, to appear on 2022 [bibTex]
, - Hermes: Fault-tolerant middleware for blockchain interoperability, article in Future Generation Computer Systems, to appear on 2022 [bibTex]
, - Integrating an academic management system with blockchain: A case study, article in Blockchain: Research and Applications vol. 3 (4), Dec. 2022, Elsevier [bibTex]
, - LINES: muLtImodal traNsportation rEsilience analySis, article in Sustainability, to appear on 2022, MDPI [bibTex]
, - MIRES: Intrusion Recovery for Applications based on Backend-as-a-Service, article in , to appear on 2022, IEEE [bibTex]
, - Modeling the Geospatial Evolution of COVID-19 using Spatio-temporal Convolutional Sequence-to-sequence Neural Networks, article in ACM Transactions on Spatial Algorithms and Systems vol. 8 (4) pp. 1-19, Dec. 2022, ACM [Article] [DOI Article link] [bibTex]
, - VeilGraph: Incremental Graph Stream Processing, article in Journal of Big Data, to appear on 2022, Springer [bibTex]
, - Water Consumption Pattern Analysis Using Biclustering: When, Why and How, article in Water, to appear on 2022, MDPI [DOI Article link] [bibTex]
, - Multiple-Input Neural Networks for Time Series Forecasting Incorporating Historical and Prospective Context, article in Data Mining and Knowledge Discovery, Nov. 2022 [bibTex]
, - Stochastic simulated annealing for directed feedback vertex set, article in Applied Soft Computing vol. 129 pp. 109607, Nov. 2022, Elsevier [Article] [DOI Article link] [Supplementary Material] [bibTex]
, - Efficiently Identifying Disguised Missing Values in Heterogeneous, Text-Rich Data, article in Transactions on Large-Scale Data- and Knowledge-Centered Systems vol. 13410, Oct. 2022, Lecture Notes in Computer Science, Springer [Article] [bibTex]
, - AcX: system, techniques, and experiments for Acronym eXpansion, article in Proceedings of the VLDB Endowment, Sep. 2022, VLDB Endowment [bibTex] [PDF]
, - Combining Rigorous Requirements Specifications with Low-Code Platforms to Rapid Development Software Business Applications, article in Applied Sciences vol. 12 (9556), Sep. 2022, MDPI [DOI Article link] [bibTex]
, - Do You Need a Distributed Ledger Technology Interoperability Solution?, article in Distributed Ledger Technologies: Research and Practice, ACM Journal pp. (accepted), Sep. 2022, ACM [DOI Article link] [bibTex] [Video]
, - Time-lagged correlation analysis of shellfish toxicity reveals predictive links to adjacent areas, species, and environmental conditions, article in Toxins, Sep. 2022 [bibTex]
, - Learning Prognostic Models Using a Mixture of Biclustering and Triclustering: Predicting the Need for Non-Invasive Ventilation in Amyotrophic Lateral Sclerosis, article in Journal of Biomedical Informatics, Aug. 2022 [bibTex]
, - Kidney cancer biomarker selection using regularized survival models, article in Cells, Jul. 2022 [bibTex]
, - A blueprint for conscious machines, article in Proceedings of the National Academy of Sciences vol. 119 (23), Jun. 2022 [Article] [DOI Article link] [bibTex]
, - Associative Analysis of Inefficiencies and Station Activity Levels in Emergency Response, article in International Journal of Geo-Information, Jun. 2022 [bibTex]
, - DeepData: Machine Learning in the Marine Ecosystems, article in Expert Systems With Applications, Jun. 2022 [bibTex]
, - Route choice estimation in rail transit systems using smart card data: handling vehicle schedule and walking time uncertainties, article in European Transport and Research Review (ETRR), Jun. 2022 [bibTex]
, - Digital media and misinformation: An outlook on multidisciplinary strategies against manipulation, article in Journal of Computational Social Science, May. 2022, Springer [DOI Article link] [bibTex]
, - On the challenges of predicting treatment response in Hodgkin’s Lymphoma using transcriptomic data, article in BMC Genomics, May. 2022, BioMed Central Ltd [bibTex]
, - Composing Music Inspired by Sculpture: A Cross-Domain Mapping and Genetic Algorithm Approach, article in Entropy vol. 24 (4) pp. 468-491, Mar. 2022, MDPI (https://www.mdpi.com/journal/entropy) [DOI Article link] [bibTex]
, - Enrichment analysis on regulatory subspaces: a novel direction for the superior description of cellular responses to SARS-CoV-2, article in Computers in Biology and Medicine, Elsevier, Mar. 2022, Elsevier [bibTex]
, - Totoro: Identifying Active Reactions During the Transient State for Metabolic Perturbations, article in Frontiers in Genetics vol. 13 pp. 815476, Mar. 2022 [DOI Article link] [bibTex]
, - Graph integration of structured, semistructured and unstructured data for data journalism, article in Information Systems vol. 104, Feb. 2022, Elsevier [bibTex]
, - Impact of metrics on biclustering solution and quality: a review, article in Pattern Recognition, Feb. 2022, Elsevier [bibTex]
, - IPOscore: an interactive web-based platform for postoperative surgical complications analysis and prediction in the oncology domain, article in Computer Methods and Programs in Biomedicine, Feb. 2022, Elsevier [bibTex]
, - ROSIE: RObust Sparse ensemble for outlIEr detection and gene selection in cancer omics data, article in Statistical Methods in Medical Research, Feb. 2022 [DOI Article link] [bibTex]
, - A Novel Deep Learning Approach Using Contextual Embeddings for Toponym Resolution, article in ISPRS International Journal of Geo-Information vol. 11 (1), Jan. 2022, MDPI [Article] [DOI Article link] [bibTex] [PDF]
, - Hermes: Fault-tolerant middleware for blockchain interoperability, article in Future Generation Computer Systems vol. 129 pp. 236-251, Jan. 2022 [DOI Article link] [bibTex]
, - Heuristics’ Library for Enterprise Architecture and Portfolio Alignment, article in International Journal of Information Technology Project Management vol. 13 (1) pp. 1-23, Jan. 2022 [DOI Article link] [bibTex]
, - Range Minimum Queries in Minimal Space, article in Theoretical Computer Science, Jan. 2022, Elsevier [bibTex] [PDF]
, , 2021
- A practical succinct dynamic graph representation, article in Information and Computation, Dec. 2021, Elsevier [Article] [DOI Article link] [bibTex]
, - Analyzing Twitter networks using graph embeddings: an application to the British case, article in Journal of Computational Social Science, to appear on 2021 [DOI Article link] [bibTex]
, - Closing the Gender Gap in Legislative Debates: The Role of Gender Quotas, article in Political Behavior, to appear on 2021 [DOI Article link] [bibTex]
, - Coupling sparse Cox models with clustering of longitudinal transcriptomics data for trauma prognosis, article in BioData Mining, to appear on 2021 [bibTex]
, - Eliciting fairness in N-player network games through degree-based role assignment, article in Complexity pp. 20, to appear on 2021, Hindawi [bibTex] [PDF]
, - Geospatial Data Disaggregation through Self-Trained Encoder–Decoder Convolutional Models, article in ISPRS International Journal of Geo-Information. vol. 10 (9), to appear on 2021 [DOI Article link] [bibTex]
, - Integrative Analysis of Multimodal Traffic Data: Addressing Open Challenges using Big Data Analytics in the City of Lisbon, article in European Transport Research Review (ETRR), Dec. 2021 [bibTex]
, - Mining pre-surgical patterns able to discriminate post-surgical outcomes in the oncological domain, article in IEEE Journal of Biomedical and Health Informatics, to appear on 2021, IEEE EMBS [bibTex]
, - On How to Incorporate Public Sources of Situational Context in Descriptive and Predictive Models of Traffic Data, article in European Transport Research Review (ETRR), Dec. 2021 [bibTex]
, - On the predictability of postoperative complications for cancer patients: a Portuguese cohort study, article in BMC Medical Informatics and Decision Making, to appear on 2021 [bibTex]
, - Predicting postoperative complications in cancer patients: A survey bridging classical and machine learning contributions to postsurgical risk analysis, article in Cancers, MDPI, to appear on 2021 [bibTex]
, - Revealing semantic and emotional structure of suicide notes with cognitive network science, article in Scientific Reports, to appear on 2021 [bibTex]
, - Sanare: Pluggable Intrusion Recovery for Web Applications, article in IEEE Transactions on Dependable and Secure Computing, Dec. 2021, IEEE [DOI Article link] [bibTex] [PDF]
, - Small Longest Tandem Scattered Subsequences., article in Sci. Ann. Comput. Sci. vol. 31 (1) pp. 79-110, to appear on 2021 [Article] [DOI Article link] [bibTex]
, - Sustainability Requirements of Digital Twin-Based Systems: A Meta Systematic Literature Review, article in Applied Sciences vol. 11 (5519), to appear on 2021, MDPI [DOI Article link] [bibTex]
, - Linguistic Patterns, Styles, and Guidelines for Writing Requirements Specifications: Focus on Use Cases and Scenarios, article in IEEE Access pp. 26, Oct. 2021, IEEE [bibTex]
, - Multi-label classification of legislative contents with hierarchical label attention networks, article in International Journal on Digital Libraries vol. 2021, Oct. 2021, Springer [DOI Article link] [bibTex]
, - Vitamin D-related polymorphisms and vitamin D levels as risk biomarkers of COVID-19 disease severity, article in Scientific Reports vol. 11 pp. 20837, Oct. 2021, Springer Nature [DOI Article link] [bibTex] [PDF]
, - DI2: prior-free and multi-item discretization of biological data and its applications, article in BMC Bioinformatics, Sep. 2021 [bibTex]
, - Dynamic modeling of bone remodeling, osteolytic metastasis and PK/PD therapy: introducing variable order derivatives as a simplification technique, article in , Sep. 2021 [DOI Article link] [bibTex]
, - Linguistic Resources for Paraphrase Generation in Portuguese: A Lexicon-Grammar Approach, article in Language Resources and Evaluation, Sep. 2021, Springer International Publishing [bibTex] [PDF]
, - Spatiotemporal Correlation Feature Spaces to support Anomaly Detection in Water Distribution Networks, article in Water, Sep. 2021, MDPI [bibTex]
, - Assigning a house for refugees: an application of a multiple criteria nominal classification method, article in Operational Research vol. 21 pp. 2651-2687, Jul. 2021, Springer Berlin Heidelberg [DOI Article link] [bibTex] [PDF]
, - Predicting Biologic Therapy Outcome of Patients With Spondyloarthritis: Joint Models for Longitudinal and Survival Analysis, article in JMIR MEDICAL INFORMATICS vol. 9 (7) pp. e26823, Jul. 2021 [DOI Article link] [bibTex]
, - Understanding the impacts of the COVID-19 pandemic on public transportation travel patterns in the city of Lisbon, article in Sustainability, Jul. 2021, MDPI [bibTex]
, - A Computational Creativity Approach From Music to Images, article in SIGEVOlution vol. 14 (2), Jun. 2021, ACM Special Interest Group on Genetic and Evolutionary Computation [Article] [bibTex]
, - A multiple criteria socio-technical approach for the Portuguese Army Special Forces recruitment, article in 4OR, Jun. 2021, Springer Berlin Heidelberg [DOI Article link] [bibTex] [PDF]
, - An analysis of the graph processing landscape, article in Journal of Big Data vol. 8 (55), Apr. 2021, Springer [DOI Article link] [bibTex]
, - Linguistic Patterns and Linguistic Styles for Requirements Specification: Focus on Data Entities, article in Applied Sciences vol. 11 (9) pp. 34, Apr. 2021, MDPI [DOI Article link] [bibTex]
, - A comprehensive evaluation of binning methods to recover human gut microbial species from a non-redundant reference gene catalog, article in NAR Genomics and Bioinformatics vol. 3 (1) pp. lqab009, Mar. 2021 [DOI Article link] [bibTex]
, - A Review of Recent Machine Learning Advances for Forecasting Harmful Algal Blooms and Shellfish Contamination, article in Journal of Marine Science and Engineering vol. 9 (3) pp. 283, Mar. 2021 [DOI Article link] [bibTex]
, - COVID-19 in Portugal: predictability of hospitalization, ICU and respiratory-assistance needs, article in Journal of Medical Internet Research (JMIR, https://www.jmir.org), Mar. 2021 [bibTex]
, - Empowering Investigative Journalism with Graph-based Heterogeneous Data Management, article in IEEE Data Engineering Bulletin vol. 44 (3) pp. 12-26, Mar. 2021, IEEE [Article] [bibTex]
, - The Role of Network Science in Glioblastoma, article in Cancers vol. 13 (5) pp. 1045, Mar. 2021 [DOI Article link] [bibTex]
, - FleBiC: Learning classifiers from high-dimensional biomedical data using discriminative biclusters with non-constant patterns, article in Pattern Recognition, Feb. 2021, Elsevier [bibTex]
, - Outlier Detection for Multivariate Time Series Using Dynamic Bayesian Networks, article in Applied Sciences-Basel vol. 11 (4), Feb. 2021 [DOI Article link] [bibTex]
, - Dynamic Expression of Brain Functional Systems Disclosed by Fine-Scale Analysis of Edge Time Series, article in Network Neuroscience, Jan. 2021 [DOI Article link] [bibTex]
, - G-Tric: generating three-way synthetic datasets with triclustering solutions, article in BMC Bioinformatics, Jan. 2021 [Article] [bibTex]
, - Mining actionable patterns of road mobility from heterogeneous traffic data using biclustering, article in IEEE Transactions on Intelligent Transportation Systems, Jan. 2021, IEEE [bibTex]
, - Structured sparsity regularization for analyzing high-dimensional omics data, article in Briefings in Bioinformatics vol. 22 (1) pp. 77-87, Jan. 2021 [DOI Article link] [bibTex]
, International Conferences: 65
2022
- Advances in the spatiotemporal profiling of public transport users in the city of Lisbon, presented at Transport Research Arena (TRA), to appear on 2022 [bibTex]
, - Annotating Arguments in a Corpus of Opinion Articles, presented at International Conference on Language Resources and Evaluation, to appear on 2022 [bibTex]
, - Context-situated visualization of biclusters to aid decisions: going beyond subspaces with parallel coordinates, presented at International Conference on Advanced Visual Interfaces (AVI), to appear on 2022 [bibTex]
, - Is there any best practice principles to estimate bus alighting passengers from incomplete smart card transactions?, presented at Transport Research Arena (TRA), to appear on 2022 [bibTex]
, - MINT – Mainstream and Independent News Text Corpus, presented at Proceedings of the International Conference on Computational Processing of the Portuguese Language, PROPOR 2022, to appear on 2022 [bibTex]
, - Planning for more resilient urban transportation systems: Lessons learned from the Covid-19 pandemic, presented at Transport Research Arena (TRA), to appear on 2022 [bibTex]
, - Predicting Argument Density from Multiple Annotations, presented at International Conference on Applications of Natural Language to Information Systems, to appear on 2022 [bibTex]
, - SemantifyingBPMN: a tool to generate BPMN models using DEMO, presented at ER, to appear on 2022 [bibTex]
, - SS-PT: A Stance and Sentiment Data Set from Portuguese Quoted Tweets, presented at PROPOR 2022, to appear on 2022 [bibTex]
, - Comparative Evaluation of Classification Indexes and Outlier Detection of Microcytic Anaemias in a Portuguese Sample, presented at 21st EPIA Conference on Artificial Intelligence (EPIA), Nov. 2022 [DOI Article link] [bibTex]
, - Extraction of structural and semantic features for the identification of Psychosis in European Portuguese, presented at Proc. IberSPEECH 2022, Nov. 2022 [bibTex] [PDF]
, - Leveraging Practitioners’ Feedback to Improve a Security Linter, presented at 37th IEEE/ACM International Conference on Automated Software Engineering, Nov. 2022 [bibTex] [PDF]
, - A Catalog of Security Patterns, presented at 29th Conference on Pattern Languages of Programs (PLoP22), Oct. 2022 [bibTex] [Video]
, - Assessing Policy, Loss and Planning Combinations in Reinforcement Learning using a New Modular Architecture, presented at EPIA Conference on Artificial Intelligence, Sep. 2022 [DOI Article link] [bibTex]
, - Using a Siamese Network to Accurately Detect Ischemic Stroke in Computed Tomography Scans, presented at EPIA Conference on Artificial Intelligence, Sep. 2022 [DOI Article link] [bibTex]
, - Latent Variable Modelling and Variational Inference for scRNA-seq Differential Expression Analysis, presented at 10th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), Aug. 2022 [DOI Article link] [bibTex]
, - Maestro: An Extensible General-Purpose Data Gathering and Classification Platform, presented at 30th International Conference on Information Systems Development, Aug. 2022 [bibTex]
, - Towards the Evaluation of Software Products from an Environmental Sustainability Perspective, presented at 30th International Conference on Information Systems Development, Aug. 2022 [bibTex]
, - Assessing the Impact of Attention and Self-Attention Mechanisms on the Classification of Skin Lesions, presented at IEEE International Joint Conference on Neural Networks, Jul. 2022 [bibTex] [PDF]
, - Comparing Different Approaches for Detecting Hate Speech in Online Portuguese Comments, presented at 11th Symposium on Languages, Applications and Technologies (SLATE 2022), Jul. 2022 [DOI Article link] [bibTex]
, - Semi-Supervised Annotation of Portuguese Hate Speech Across Social Media Domains, presented at 11th Symposium on Languages, Applications and Technologies (SLATE 2022), Jul. 2022 [DOI Article link] [bibTex]
, - A new European Portuguese corpus for the study of Psychosis through speech analysis, presented at Proceedings of the Thirteenth Language Resources and Evaluation Conference, LREC2022, Jun. 2022 [bibTex] [PDF]
, - Hate Speech Dynamics Against African descent, Roma and LGBTQI Communities in Portugal, presented at LREC 2022 - 13th Conference on Language Resources and Evaluation, Jun. 2022 [bibTex]
, - Towards the Art of Writing Agile Requirements with User Stories, Acceptance Criteria, and Related Constructs, presented at ENASE'2022, Apr. 2022 [bibTex]
, - Consolidation of massive medical emergency events with heterogeneous situational context data sources, presented at 6th International workshop on Data Analytics solutions for Real-LIfe APplications @ EDBT/ICDT 2022, Mar. 2022 [bibTex] [PDF]
, - Automatic Generation of Neural Architecture Search Spaces, presented at AAAI-2022 Workshop on Combining Learning and Reasoning: Programming Languages, Formalisms, and Representations (CLeaR), Feb. 2022 [bibTex]
, - Functional characterization of transcriptional regulatory networks of yeast species, presented at International School and Conference on Network Science (NetSciX'22), Feb. 2022 [DOI Article link] [bibTex]
, - Platform-Independent Specifications for Robotic Process Automation Applications, presented at International Conference on Model-Driven Engineering and Software Development (MODELSWARD'2022), Feb. 2022 [bibTex]
, 2021
- A Reference Motivation Layer for Smart Health – an Enterprise Architecture Approach, presented at Enterprise Engineering Working Conference (EEWC 2021), Dec. 2021 [bibTex]
, - Automation of Enterprise Architecture Discovery based on Event Mining from API Gateway logs: State of the Art, presented at IEEE 23rd Conference on Business Informatics (CBI), to appear on 2021 [DOI Article link] [bibTex]
, - Collaborative discovery and enrichment of business process models using a semantification approach, presented at IEEE 23rd Conference on Business Informatics (CBI), to appear on 2021 [DOI Article link] [bibTex]
, - Designing an IT Risk Management Ontology grounded on Systematic Literature Review to reduce implementation effort, presented at 54th HICSS, to appear on 2021 [DOI Article link] [bibTex]
, - EcoAndroid: An Android Studio Plugin for Developing Energy-Efficient Java Mobile Applications, presented at 2021 IEEE 21st International Conference on Software Quality, Reliability and Security (QRS), Dec. 2021 [DOI Article link] [bibTex] [PDF]
, - Encoder-decoder architectures for clinically relevant coronary artery segmentation, presented at 11th International Conference on Computational Advances in Bio and medical Sciences, Dec. 2021 [bibTex] [PDF]
, - Fitting Regularized Population Dynamics with Neural Differential Equations, presented at NeurIPS 2021, The Symbiosis of Deep Learning and Differential Equations (DLDE) workshop, Dec. 2021 [bibTex]
, - Discovering Conflicts of Interest across Heterogeneous Data Sources with ConnectionLens (demo paper), presented at ACM International Conference on Information and Knowledge Management (CIKM 2021), Nov. 2021 [bibTex]
, - Using Recurrent Neural Networks to model the dynamic behaviour of the C. Elegans nervous system, presented at Champalimaud Research Symposium 2021, Oct. 2021 [bibTex]
, - Assessing Robustness in Multimodal Transportation Systems: A case study in Lisbon, presented at European Transport Conference (ETC), Sep. 2021 [bibTex]
, - Enabling Cross- Jurisdiction Digital Asset Transfer, presented at IEEE International Conference on Services Computing (SCC), Sep. 2021 [bibTex]
, - Generating Test Cases from Use Cases and Structured Scenarios: Experiences with the RSL Language, presented at International Conference on Information Systems Development'2021, Sep. 2021 [bibTex]
, - Inference of Dynamic Origin-Destination Matrices with Trip and Transfer Status from Individual Smart Card Data, presented at European Transport Conference (ETC), Sep. 2021 [bibTex]
, - MuSyFI - Music Synthesis From Images, presented at International Conference on Computational Creativity, ICCC’21, Sep. 2021 [bibTex]
, - Using Soft Labels to Model Uncertainty in Medical Image Segmentation, presented at MICCAI Brain Lesion workshop, Sep. 2021 [bibTex] [PDF]
, - Video-based tracking of fishes in the Lisbon Oceanarium, presented at OCEANS 2021, Sep. 2021 [bibTex]
, - Where are the Passengers? Individual Passenger Route Choice Estimation from Gate Information in Urban Rail Transit Systems, presented at European Transport Conference (ETC), Sep. 2021 [bibTex]
, , - Combining Off and On-Policy Training in Model-Based Reinforcement Learning, presented at Adaptive and Learning Agents @ AAMAS 2021, Jun. 2021 [bibTex] [PDF]
, - Eliciting Fairness in Multiplayer Bargaining through Network-based Role Assignment, presented at 20th International Conference on Autonomous Agents and Multiagent Systems (AAMAS 2021), May. 2021 [bibTex] [PDF]
, - Enterprise Architecture Patterns for GDPR Compliance, presented at 23rd International Conference on Enterprise Information Systems (ICEIS 2021), Apr. 2021 [bibTex]
, - Framing Enterprise Engineering within General System’s Theory: Perspectives of a Human Centered Future, presented at 10th Enterprise Engineering Working Conference (EEWC), Apr. 2021 [bibTex]
, - From Music to Image, a Computational Creativity Approach, presented at Artificial Intelligence in Music, Sound, Art and Design. EvoMUSART, Apr. 2021 [DOI Article link] [bibTex]
, - Privacy by Design Enterprise Architecture Patterns, presented at 23rd International Conference on Enterprise Information Systems (ICEIS 2021), Apr. 2021 [bibTex]
, - Sculpture Inspired Musical Composition, One Possible Approach, presented at Artificial Intelligence in Music, Sound, Art and Design. EvoMUSART, Apr. 2021 [DOI Article link] [bibTex]
, - Systematic Selection and Prioritization of Communication Channels in the Healthcare Sector, presented at 23rd International Conference on Enterprise Information Systems (ICEIS 2021), Apr. 2021 [bibTex]
, - UNIANO: robust and efficient anomaly consensus in time series sensitive to cross-correlated anomaly profiles, presented at SIAM International Conference on Data Mining, Apr. 2021 [bibTex]
, - Decentralized Enforcement of DEMO Action Rules Using Blockchain Smart Contracts, presented at 10th Enterprise Engineering Working Conference (EEWC), Mar. 2021 [bibTex]
, - Integrating Benefits Dependency Network in ArchiMate, 10th Enterprise Engineering Working Conference (EEWC, Mar. 2021 [bibTex]
, - “A Machine Learning Approach for Real Time Prediction of Last Minute Medical Appointments No-Shows, presented at 14th International Conference on Health Informatics (HEALTHINF 2021), Feb. 2021 [bibTex]
, - Acronym Expander at SDU@AAAI-21: an Acronym Disambiguation Module, presented at Proceedings of the Workshop on Scientific Document Understanding co-located with 35th AAAI Conference on Artificial Intelligence (SDU@AAAI 2021), Feb. 2021 [bibTex]
, - fMRI Multiple Missing Values Imputation Regularized by a Recurrent Denoiser, presented at Artificial Intelligence in Medicine (AIME), Feb. 2021 [bibTex]
, - Designing an IT Risk Management Ontology grounded on Systematic Literature Review, presented at Hawaii International Conference on System Sciences, Jan. 2021 [bibTex]
, - Designing and Validating a Blockchain-based Architecture to Enforce Privacy in Human Robot Interaction, presented at Hawaii International Conference on System Sciences, Jan. 2021 [bibTex]
, - Mobile Marketing in Health: User Experience Guiding the Implementation of a Medical Booking Application, presented at Biomedical Engineering Systems and Technologies. BIOSTEC 2020, Jan. 2021 [DOI Article link] [bibTex]
, - Process Digitalization using Blockchain –EU Parliament Elections Case Study, presented at Proceedings of the 9th International Conference on Model-Driven Engineering and Software Development (MODELSWARD), Jan. 2021 [DOI Article link] [bibTex]
, - Reference Architecture for Project, Program and Portfolio Governance, presented at 22nd International Conference on Enterprise Information Systems, ICEIS 2020, Virtual Event, Revised Selected Papers, Jan. 2021 [bibTex]
, National Conferences: 1
2022
- Securing Cross-Chain Asset Transfers on Permissioned Blockchains, presented at First Workshop on Blockchain Technologies and Trusted Execution Environments (BlockTEE 2022), Jun. 2022 [bibTex] [Video]
, Dissertations
PhD Theses: 3
2023
- Helena Galhardas and Dennis Shasha, Towards Effective and Effortless Data Cleaning: from Automatic Approaches to User Involvement, PhD Thesis at Instituto Superior Técnico, Feb. 2023 [bibTex]
advised by 2022
- Susana Vinga and Luís Costa, Computational Biology for Modeling Oncological Omics Data: the way towards personalized medicine, PhD Thesis at Instituto Superior Técnico, Dec. 2022 [bibTex]
advised by 2021
- Susana Vinga and Arlindo L. Oliveira, Network-based sparse regularization for the identification of disease signatures, PhD Thesis at Instituto Superior Técnico, Feb. 2021 [bibTex]
advised by MSc Theses: 46
2022
- Susana Vinga, Classification of microcytic anaemias using machine learning methods, MSc Thesis, Nov. 2022 [bibTex]
advised by - Mário J. Silva and José Maria Moreira, Predicting Imminet Health Outcomes from Lab Results, MSc Thesis at Instituto Superior Tecnico, Nov. 2022 [bibTex]
advised by - Paula Carvalho and Fernando Batista, Semi-Automatic Selection and Annotation of Hate Speech from Social Media, MSc Thesis at Instituto Superior Técnico, Nov. 2022 [bibTex]
advised by - Susana Vinga and Emanuel Gonçalves, Sparse and Interpretable Models for Drug Mechanism-of-Action Discovery, MSc Thesis at Instituto Superior Técnico, Nov. 2022 [bibTex]
advised by - Arlindo L. Oliveira, Aceleração da Aprendizagem por Reforço Usando Arquitecturas de Redes Neuronais Profundas Baseadas em Transformadores, MSc Thesis at Instituto Superior Técnico, Oct. 2022 [bibTex]
advised by - Arlindo L. Oliveira, Metodos para Segmentação de Imagens usando Arquitecturas como Mecanismos de Atenção, MSc Thesis at Instituto Superior Técnico, Oct. 2022 [bibTex]
advised by - Arlindo L. Oliveira and Catarina Fonseca, Prognostico de Acidentes Vasculares Cerebrais com Base em Tomografia Computorizada Usando a Aprendizagem Profunda, MSc Thesis, Oct. 2022 [bibTex]
advised by - Susana Vinga and Alexandra Carvalho, Multivariate Time-Series Modeling of Shellfish Contamination with Dynamic Bayesian Networks, MSc Thesis, Jun. 2022 [bibTex]
advised by 2021
- Sérgio Guerreiro, Collaborative discovery and enrichment of business process models using a semantification approach, MSc Thesis at Instituto Superior Técnico, work in progresson 2021 [bibTex]
advised by - Bruno Martins, Convolutional Neural Networks for the Classification of 3D Medical Images, MSc Thesis, work in progresson 2021 [bibTex]
advised by - Rui Miguel Carrasqueiro Henriques, Generative modeling of demand in the public transport network in the city of Lisbon: context-sensitive and multi-modal dynamics, MSc Thesis, Dec. 2021 [bibTex]
advised by - H. Sofia Pinto, From Music to Animations, A Computational Creativity Approach, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2021 [bibTex]
advised by - H. Sofia Pinto and José Borbinha, Local Web Application Development, Framework Proposal and Demonstration on Two Case Studies, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2021 [bibTex]
advised by - Susana Vinga and Marta Lopes, Time Series Analysis and Forecasting of Shellfish Contamination and Safety, MSc Thesis, Nov. 2021 [bibTex]
advised by - Mário J. Silva, Identifying patient subgroups in chronic diseases by phenotypic clustering, MSc Thesis at Instituto Superior Técnico, Oct. 2021 [bibTex]
advised by - H. Sofia Pinto and David Martins de Matos, GiTab: Automatic Tablature Music Composition for Classical Guitar, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Sep. 2021 [bibTex]
advised by - Susana Vinga and Alexandra M. Carvalho, Sparse Dynamic Bayesian network estimation using generalized linear models, MSc Thesis, Sep. 2021 [bibTex]
advised by - Susana Vinga and Alexandra M. Carvalho, Survival analysis of transcriptomic high-dimensional oncological data for the identification of cancer biomarkers, MSc Thesis, Sep. 2021 [bibTex]
advised by - André Vasconcelos, Privacy by Design Enterprise Architecture Patterns, MSc Thesis at Instuto Superior Tecnico, Aug. 2021 [bibTex]
advised by - Susana Vinga and Alexandra Carvalho, Dynamic Bayesian networks for clinical decision support on ankylosing spondylitis patients under biological therapies, MSc Thesis, Jul. 2021 [bibTex]
advised by - Susana Vinga and Alexandra Carvalho, Predicting Ankylosing Spondylitis Treatment Outcome Using Model-based Methods, MSc Thesis, Jul. 2021 [bibTex]
advised by - Rui Miguel Carrasqueiro Henriques and Diogo Ferreira, An exploratory analysis of Portuguese hospital relationships on behalf of financial sustainability, MSc Thesis, Feb. 2021 [bibTex]
advised by - Rui Miguel Carrasqueiro Henriques and Elisabete Arsénio, Análise de fluxos na rede pública de autocarros de Lisboa, MSc Thesis, Feb. 2021 [bibTex]
advised by - Rui Miguel Carrasqueiro Henriques and Elisabete Arsénio, Descoberta de padrões circulação multimodal apartir de fontes heterógeneas de dados urbanos, MSc Thesis, Feb. 2021 [bibTex]
advised by - Rui Miguel Carrasqueiro Henriques and Rafael Costa, Descoberta de padrões em dados oncológicos para a compreensão dos factores de risco cirúrgico, MSc Thesis, Feb. 2021 [bibTex]
advised by - H. Sofia Pinto and A. P. Francisco, Analysis of retweeting behaviour on Twitter, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
advised by - Arlindo L. Oliveira and Mário Figueiredo, Automated Assessment of Coronary Artery Stenosis in X-ray Angiography using Deep Neural Networks, MSc Thesis, Jan. 2021 [bibTex]
advised by - Sérgio Guerreiro and João Silva Sequeira, BlockRobot: Increasing Privacy in Human Robot Interaction by Using Blockchain, MSc Thesis at Instuto Superior Tecnico, Jan. 2021 [bibTex]
advised by - Susana Vinga and Alexandra Carvalho, Cloud-based web application for multivariate time series analysis: A language-agnostic integrative architecture for short- and long-running machine learning algorithms, MSc Thesis, Jan. 2021 [bibTex]
advised by - Arlindo L. Oliveira, Combining Off and On-policy Training in Deep Reinforcement Learning, MSc Thesis at IST, Jan. 2021 [bibTex]
advised by advised by - Helena Galhardas and Nuno J. Mamede, Degree Coordination Decision Support System, MSc Thesis, Jan. 2021 [bibTex]
advised by - Rui Miguel Carrasqueiro Henriques and Susana Vinga, Descriptive and predictive modeling of water distribution network dynamics using multivariate time series data, MSc Thesis, Jan. 2021 [bibTex]
advised by - Sérgio Guerreiro and Pedro Manuel Moreira Vaz Antunes de Sousa, Dynamic Stable Business Process Operation for Cyber Security Enforcement Using Atlas, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
advised by - H. Sofia Pinto and Nuno Correia, From Movement to Sound and Music, a Computational Creativity approach, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
advised by - Alberto Rodrigues da Silva, From Rigorous Requirements and User Interfaces Specifications into Software Business Applications: The ASL Approach, MSc Thesis, Jan. 2021 [bibTex]
advised by - Sérgio Guerreiro and Pedro Manuel Moreira Vaz Antunes de Sousa, Implementação de Demo Action Model em Blockchain Smart Contracts, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
advised by - Arlindo L. Oliveira and A. P. Francisco, Imputation Techiques for Clinical Data of Ischemic Stroke Patients, MSc Thesis at IST, Jan. 2021 [bibTex]
advised by - Helena Galhardas, IST CSE Information System, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
advised by - Sérgio Guerreiro and Ruben Pereira, IT Risk Management Ontology from representation to optimization using Enterprise Ontology, MSc Thesis at Instituto Superior Técnico\, Jan. 2021 [bibTex]
advised by - Susana Vinga and Alexandra Carvalho, Machine Learning methods for finding predictors of Rheumatoid Arthritis treatment response, MSc Thesis, Jan. 2021 [bibTex]
advised by - H. Sofia Pinto and Rui Pereira Jorge, Music Creation from Found Sounds - An Approach from Computational Creativity, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
advised by - Alberto Rodrigues da Silva and Jacinto Estima, RiverCure Portal: Exploring Geographic Features on Context Definition and Integration with the HiSTAV Hydrometric Toll, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
advised by - Rodrigo Rodrigues, SCALEET: A Scalable and Performant Permissionless Blockchain, MSc Thesis, Jan. 2021 [bibTex]
advised by - José Borbinha and H. Sofia Pinto, Ser Músico em Portugal - Publicação e Visualização de dados com Solução Mediawiki e Arquitetura MVC, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
advised by - H. Sofia Pinto and Alexandre Bernardino, Tracking animals in underwater videos, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
advised by as Editors
Other Publications: 2
2021
, editors,- Acronym Expander at SDU@AAAI-21: an Acronym Disambiguation Module, Feb. 2021 [bibTex]
, editors, Special Issues of Journals (editor): 1
2021
- Special Issue on Content Credibility, Journal of Web Semantics vol. 71 (11), Nov. 2021, Elsevier [DOI Editorial link] [bibTex]
, editors, Reports
Technical Reports: 1
2021
- IST CSE Doctoral Degree Information Management System: Requirements Specification, INESC-ID Tec. Rep. 1/2021, Jan. 2021 [bibTex] [PDF]
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