Publications
Filter Publications: 2021 - 2023
Books
Books: 1
2022
- , Enterprise Architecture and Cartography. From practice to theory; from representation to design, book, Nov. 2022, Springer [bibTex]
Book Chapters: 6
2022
- , Business Process Design, chapter of Enterprise Architecture and Cartography: From Practice to Theory; From Representation to Design, to appear on 2022, Springer International Publishing [bibTex]
- , Towards Trustworthy Artificial Intelligent Systems, chapter of COVID-19 Contact Tracing Applications in Portugal: Effectiveness and Privacy Issues, Sep. 2022, Springer [bibTex]
2021
- , Political Opinions on the Past Web, chapter of In The Past Web, to appear on 2021, Springer [bibTex]
- , Legislative Debates in the Portuguese Assembleia da República, chapter of In The Politics of Legislative Debates, to appear on 2021, Oxford University Press [bibTex]
- , Towards Conscious Enterprises: The Role of Enterprise Engineering in Realizing Living Sciences Paradigms into Management Sciences, chapter of Engineering the Transformation of the Enterprise, Sep. 2021, Springer [bibTex]
- , Artificial Intelligence Applications in Stroke, chapter of Precision Medicine in Stroke, May. 2021, Springer Nature [bibTex]
Articles
International Journal Articles: 83
2023
- , Learning the dynamics of realistic models of C. elegans nervous system with recurrent neural networks, article in Scientific Reports, Jan. 2023, Springer Nature [bibTex] [PDF]
2022
- , A supervised learning model for medical appointments no-show management, article in International Journal of Medical Engineering and Informatics vol. 14 (1) pp. 90-104, to appear on 2022, Inderscience Enterprises Ltd. [DOI Article link] [bibTex] [Video]
- , A Survey on Blockchain Interoperability: Past, Present, and Future Trends, article in ACM Computing Surveys, to appear on 2022, ACM [bibTex]
- , A Survey on Business Process View Integration: Past, Present, and Future Applications to Blockchain, article in Business Process Management Journal, to appear on 2022, World Scienti c Publishing Company [bibTex]
- , Assessing Robustness in Multimodal Transportation Systems: A case study in Lisbon, article in European Transport Research Review, to appear on 2022 [bibTex]
- , Cache-Oblivious Hilbert Curve based Blocking-Scheme for Matrix Transposition, article in Transactions on Mathematical Software, to appear on 2022, ACM [DOI Article link] [bibTex]
- , Cooperative Decision-Making to Minimize Biased Perceived Value Effect on Business Process Decisions Using Partially Observable Markov Decision Processes, article in Operations Research Forum vol. 3 (2) pp. 1-26, to appear on 2022, Springer International Publishing [bibTex]
- , Development of deep learning segmentation models for coronary X-ray angiography: Quality assessment by a new global segmentation score and comparison with human performance, article in Revista Portuguesa de Cardiologia vol. 41 (12) pp. 1011-1021, Dec. 2022, Elsevier [Article] [DOI Article link] [bibTex]
- , DISA tool: discriminative and informative subspace assessment with categorical and numerical outcomes, article in PLOS ONE, to appear on 2022 [bibTex]
- , Hermes: Fault-tolerant middleware for blockchain interoperability, article in Future Generation Computer Systems, to appear on 2022 [bibTex]
- , Integrating an academic management system with blockchain: A case study, article in Blockchain: Research and Applications vol. 3 (4), Dec. 2022, Elsevier [bibTex]
- , LINES: muLtImodal traNsportation rEsilience analySis, article in Sustainability, to appear on 2022, MDPI [bibTex]
- , MIRES: Intrusion Recovery for Applications based on Backend-as-a-Service, article in , to appear on 2022, IEEE [bibTex]
- , Modeling the Geospatial Evolution of COVID-19 using Spatio-temporal Convolutional Sequence-to-sequence Neural Networks, article in ACM Transactions on Spatial Algorithms and Systems vol. 8 (4) pp. 1-19, Dec. 2022, ACM [Article] [DOI Article link] [bibTex]
- , VeilGraph: Incremental Graph Stream Processing, article in Journal of Big Data, to appear on 2022, Springer [bibTex]
- , Water Consumption Pattern Analysis Using Biclustering: When, Why and How, article in Water, to appear on 2022, MDPI [DOI Article link] [bibTex]
- , Multiple-Input Neural Networks for Time Series Forecasting Incorporating Historical and Prospective Context, article in Data Mining and Knowledge Discovery, Nov. 2022 [bibTex]
- , Stochastic simulated annealing for directed feedback vertex set, article in Applied Soft Computing vol. 129 pp. 109607, Nov. 2022, Elsevier [Article] [DOI Article link] [Supplementary Material] [bibTex]
- , Efficiently Identifying Disguised Missing Values in Heterogeneous, Text-Rich Data, article in Transactions on Large-Scale Data- and Knowledge-Centered Systems vol. 13410, Oct. 2022, Lecture Notes in Computer Science, Springer [Article] [bibTex]
- , AcX: system, techniques, and experiments for Acronym eXpansion, article in Proceedings of the VLDB Endowment, Sep. 2022, VLDB Endowment [bibTex] [PDF]
- , Combining Rigorous Requirements Specifications with Low-Code Platforms to Rapid Development Software Business Applications, article in Applied Sciences vol. 12 (9556), Sep. 2022, MDPI [DOI Article link] [bibTex]
- , Do You Need a Distributed Ledger Technology Interoperability Solution?, article in Distributed Ledger Technologies: Research and Practice, ACM Journal pp. (accepted), Sep. 2022, ACM [DOI Article link] [bibTex] [Video]
- , Time-lagged correlation analysis of shellfish toxicity reveals predictive links to adjacent areas, species, and environmental conditions, article in Toxins, Sep. 2022 [bibTex]
- , Learning Prognostic Models Using a Mixture of Biclustering and Triclustering: Predicting the Need for Non-Invasive Ventilation in Amyotrophic Lateral Sclerosis, article in Journal of Biomedical Informatics, Aug. 2022 [bibTex]
- , Kidney cancer biomarker selection using regularized survival models, article in Cells, Jul. 2022 [bibTex]
- , A blueprint for conscious machines, article in Proceedings of the National Academy of Sciences vol. 119 (23), Jun. 2022 [Article] [DOI Article link] [bibTex]
- , Associative Analysis of Inefficiencies and Station Activity Levels in Emergency Response, article in International Journal of Geo-Information, Jun. 2022 [bibTex]
- , DeepData: Machine Learning in the Marine Ecosystems, article in Expert Systems With Applications, Jun. 2022 [bibTex]
- , Route choice estimation in rail transit systems using smart card data: handling vehicle schedule and walking time uncertainties, article in European Transport and Research Review (ETRR), Jun. 2022 [bibTex]
- , Digital media and misinformation: An outlook on multidisciplinary strategies against manipulation, article in Journal of Computational Social Science, May. 2022, Springer [DOI Article link] [bibTex]
- , On the challenges of predicting treatment response in Hodgkin’s Lymphoma using transcriptomic data, article in BMC Genomics, May. 2022, BioMed Central Ltd [bibTex]
- , Composing Music Inspired by Sculpture: A Cross-Domain Mapping and Genetic Algorithm Approach, article in Entropy vol. 24 (4) pp. 468-491, Mar. 2022, MDPI (https://www.mdpi.com/journal/entropy) [DOI Article link] [bibTex]
- , Enrichment analysis on regulatory subspaces: a novel direction for the superior description of cellular responses to SARS-CoV-2, article in Computers in Biology and Medicine, Elsevier, Mar. 2022, Elsevier [bibTex]
- , Totoro: Identifying Active Reactions During the Transient State for Metabolic Perturbations, article in Frontiers in Genetics vol. 13 pp. 815476, Mar. 2022 [DOI Article link] [bibTex]
- , Graph integration of structured, semistructured and unstructured data for data journalism, article in Information Systems vol. 104, Feb. 2022, Elsevier [bibTex]
- , Impact of metrics on biclustering solution and quality: a review, article in Pattern Recognition, Feb. 2022, Elsevier [bibTex]
- , IPOscore: an interactive web-based platform for postoperative surgical complications analysis and prediction in the oncology domain, article in Computer Methods and Programs in Biomedicine, Feb. 2022, Elsevier [bibTex]
- , ROSIE: RObust Sparse ensemble for outlIEr detection and gene selection in cancer omics data, article in Statistical Methods in Medical Research, Feb. 2022 [DOI Article link] [bibTex]
- , A Novel Deep Learning Approach Using Contextual Embeddings for Toponym Resolution, article in ISPRS International Journal of Geo-Information vol. 11 (1), Jan. 2022, MDPI [Article] [DOI Article link] [bibTex] [PDF]
- , Hermes: Fault-tolerant middleware for blockchain interoperability, article in Future Generation Computer Systems vol. 129 pp. 236-251, Jan. 2022 [DOI Article link] [bibTex]
- , Heuristics’ Library for Enterprise Architecture and Portfolio Alignment, article in International Journal of Information Technology Project Management vol. 13 (1) pp. 1-23, Jan. 2022 [DOI Article link] [bibTex]
- , Range Minimum Queries in Minimal Space, article in Theoretical Computer Science, Jan. 2022, Elsevier [bibTex] [PDF]
2021
- , A practical succinct dynamic graph representation, article in Information and Computation, Dec. 2021, Elsevier [Article] [DOI Article link] [bibTex]
- , Analyzing Twitter networks using graph embeddings: an application to the British case, article in Journal of Computational Social Science, to appear on 2021 [DOI Article link] [bibTex]
- , Closing the Gender Gap in Legislative Debates: The Role of Gender Quotas, article in Political Behavior, to appear on 2021 [DOI Article link] [bibTex]
- , Coupling sparse Cox models with clustering of longitudinal transcriptomics data for trauma prognosis, article in BioData Mining, to appear on 2021 [bibTex]
- , Eliciting fairness in N-player network games through degree-based role assignment, article in Complexity pp. 20, to appear on 2021, Hindawi [bibTex] [PDF]
- , Geospatial Data Disaggregation through Self-Trained Encoder–Decoder Convolutional Models, article in ISPRS International Journal of Geo-Information. vol. 10 (9), to appear on 2021 [DOI Article link] [bibTex]
- , Integrative Analysis of Multimodal Traffic Data: Addressing Open Challenges using Big Data Analytics in the City of Lisbon, article in European Transport Research Review (ETRR), Dec. 2021 [bibTex]
- , Mining pre-surgical patterns able to discriminate post-surgical outcomes in the oncological domain, article in IEEE Journal of Biomedical and Health Informatics, to appear on 2021, IEEE EMBS [bibTex]
- , On How to Incorporate Public Sources of Situational Context in Descriptive and Predictive Models of Traffic Data, article in European Transport Research Review (ETRR), Dec. 2021 [bibTex]
- , On the predictability of postoperative complications for cancer patients: a Portuguese cohort study, article in BMC Medical Informatics and Decision Making, to appear on 2021 [bibTex]
- , Predicting postoperative complications in cancer patients: A survey bridging classical and machine learning contributions to postsurgical risk analysis, article in Cancers, MDPI, to appear on 2021 [bibTex]
- , Revealing semantic and emotional structure of suicide notes with cognitive network science, article in Scientific Reports, to appear on 2021 [bibTex]
- , Sanare: Pluggable Intrusion Recovery for Web Applications, article in IEEE Transactions on Dependable and Secure Computing, Dec. 2021, IEEE [DOI Article link] [bibTex] [PDF]
- , Small Longest Tandem Scattered Subsequences., article in Sci. Ann. Comput. Sci. vol. 31 (1) pp. 79-110, to appear on 2021 [Article] [DOI Article link] [bibTex]
- , Sustainability Requirements of Digital Twin-Based Systems: A Meta Systematic Literature Review, article in Applied Sciences vol. 11 (5519), to appear on 2021, MDPI [DOI Article link] [bibTex]
- , Linguistic Patterns, Styles, and Guidelines for Writing Requirements Specifications: Focus on Use Cases and Scenarios, article in IEEE Access pp. 26, Oct. 2021, IEEE [bibTex]
- , Multi-label classification of legislative contents with hierarchical label attention networks, article in International Journal on Digital Libraries vol. 2021, Oct. 2021, Springer [DOI Article link] [bibTex]
- , Vitamin D-related polymorphisms and vitamin D levels as risk biomarkers of COVID-19 disease severity, article in Scientific Reports vol. 11 pp. 20837, Oct. 2021, Springer Nature [DOI Article link] [bibTex] [PDF]
- , DI2: prior-free and multi-item discretization of biological data and its applications, article in BMC Bioinformatics, Sep. 2021 [bibTex]
- , Dynamic modeling of bone remodeling, osteolytic metastasis and PK/PD therapy: introducing variable order derivatives as a simplification technique, article in , Sep. 2021 [DOI Article link] [bibTex]
- , Linguistic Resources for Paraphrase Generation in Portuguese: A Lexicon-Grammar Approach, article in Language Resources and Evaluation, Sep. 2021, Springer International Publishing [bibTex] [PDF]
- , Spatiotemporal Correlation Feature Spaces to support Anomaly Detection in Water Distribution Networks, article in Water, Sep. 2021, MDPI [bibTex]
- , Assigning a house for refugees: an application of a multiple criteria nominal classification method, article in Operational Research vol. 21 pp. 2651-2687, Jul. 2021, Springer Berlin Heidelberg [DOI Article link] [bibTex] [PDF]
- , Predicting Biologic Therapy Outcome of Patients With Spondyloarthritis: Joint Models for Longitudinal and Survival Analysis, article in JMIR MEDICAL INFORMATICS vol. 9 (7) pp. e26823, Jul. 2021 [DOI Article link] [bibTex]
- , Understanding the impacts of the COVID-19 pandemic on public transportation travel patterns in the city of Lisbon, article in Sustainability, Jul. 2021, MDPI [bibTex]
- , A Computational Creativity Approach From Music to Images, article in SIGEVOlution vol. 14 (2), Jun. 2021, ACM Special Interest Group on Genetic and Evolutionary Computation [Article] [bibTex]
- , A multiple criteria socio-technical approach for the Portuguese Army Special Forces recruitment, article in 4OR, Jun. 2021, Springer Berlin Heidelberg [DOI Article link] [bibTex] [PDF]
- , An analysis of the graph processing landscape, article in Journal of Big Data vol. 8 (55), Apr. 2021, Springer [DOI Article link] [bibTex]
- , Linguistic Patterns and Linguistic Styles for Requirements Specification: Focus on Data Entities, article in Applied Sciences vol. 11 (9) pp. 34, Apr. 2021, MDPI [DOI Article link] [bibTex]
- , A comprehensive evaluation of binning methods to recover human gut microbial species from a non-redundant reference gene catalog, article in NAR Genomics and Bioinformatics vol. 3 (1) pp. lqab009, Mar. 2021 [DOI Article link] [bibTex]
- , A Review of Recent Machine Learning Advances for Forecasting Harmful Algal Blooms and Shellfish Contamination, article in Journal of Marine Science and Engineering vol. 9 (3) pp. 283, Mar. 2021 [DOI Article link] [bibTex]
- , COVID-19 in Portugal: predictability of hospitalization, ICU and respiratory-assistance needs, article in Journal of Medical Internet Research (JMIR, https://www.jmir.org), Mar. 2021 [bibTex]
- , Empowering Investigative Journalism with Graph-based Heterogeneous Data Management, article in IEEE Data Engineering Bulletin vol. 44 (3) pp. 12-26, Mar. 2021, IEEE [Article] [bibTex]
- , The Role of Network Science in Glioblastoma, article in Cancers vol. 13 (5) pp. 1045, Mar. 2021 [DOI Article link] [bibTex]
- , FleBiC: Learning classifiers from high-dimensional biomedical data using discriminative biclusters with non-constant patterns, article in Pattern Recognition, Feb. 2021, Elsevier [bibTex]
- , Outlier Detection for Multivariate Time Series Using Dynamic Bayesian Networks, article in Applied Sciences-Basel vol. 11 (4), Feb. 2021 [DOI Article link] [bibTex]
- , Dynamic Expression of Brain Functional Systems Disclosed by Fine-Scale Analysis of Edge Time Series, article in Network Neuroscience, Jan. 2021 [DOI Article link] [bibTex]
- , G-Tric: generating three-way synthetic datasets with triclustering solutions, article in BMC Bioinformatics, Jan. 2021 [Article] [bibTex]
- , Mining actionable patterns of road mobility from heterogeneous traffic data using biclustering, article in IEEE Transactions on Intelligent Transportation Systems, Jan. 2021, IEEE [bibTex]
- , Structured sparsity regularization for analyzing high-dimensional omics data, article in Briefings in Bioinformatics vol. 22 (1) pp. 77-87, Jan. 2021 [DOI Article link] [bibTex]
International Conferences: 65
2022
- , Advances in the spatiotemporal profiling of public transport users in the city of Lisbon, presented at Transport Research Arena (TRA), to appear on 2022 [bibTex]
- , Annotating Arguments in a Corpus of Opinion Articles, presented at International Conference on Language Resources and Evaluation, to appear on 2022 [bibTex]
- , Context-situated visualization of biclusters to aid decisions: going beyond subspaces with parallel coordinates, presented at International Conference on Advanced Visual Interfaces (AVI), to appear on 2022 [bibTex]
- , Is there any best practice principles to estimate bus alighting passengers from incomplete smart card transactions?, presented at Transport Research Arena (TRA), to appear on 2022 [bibTex]
- , MINT – Mainstream and Independent News Text Corpus, presented at Proceedings of the International Conference on Computational Processing of the Portuguese Language, PROPOR 2022, to appear on 2022 [bibTex]
- , Planning for more resilient urban transportation systems: Lessons learned from the Covid-19 pandemic, presented at Transport Research Arena (TRA), to appear on 2022 [bibTex]
- , Predicting Argument Density from Multiple Annotations, presented at International Conference on Applications of Natural Language to Information Systems, to appear on 2022 [bibTex]
- , SemantifyingBPMN: a tool to generate BPMN models using DEMO, presented at ER, to appear on 2022 [bibTex]
- , SS-PT: A Stance and Sentiment Data Set from Portuguese Quoted Tweets, presented at PROPOR 2022, to appear on 2022 [bibTex]
- , Comparative Evaluation of Classification Indexes and Outlier Detection of Microcytic Anaemias in a Portuguese Sample, presented at 21st EPIA Conference on Artificial Intelligence (EPIA), Nov. 2022 [DOI Article link] [bibTex]
- , Extraction of structural and semantic features for the identification of Psychosis in European Portuguese, presented at Proc. IberSPEECH 2022, Nov. 2022 [bibTex] [PDF]
- , Leveraging Practitioners’ Feedback to Improve a Security Linter, presented at 37th IEEE/ACM International Conference on Automated Software Engineering, Nov. 2022 [bibTex] [PDF]
- , A Catalog of Security Patterns, presented at 29th Conference on Pattern Languages of Programs (PLoP22), Oct. 2022 [bibTex] [Video]
- , Assessing Policy, Loss and Planning Combinations in Reinforcement Learning using a New Modular Architecture, presented at EPIA Conference on Artificial Intelligence, Sep. 2022 [DOI Article link] [bibTex]
- , Using a Siamese Network to Accurately Detect Ischemic Stroke in Computed Tomography Scans, presented at EPIA Conference on Artificial Intelligence, Sep. 2022 [DOI Article link] [bibTex]
- , Latent Variable Modelling and Variational Inference for scRNA-seq Differential Expression Analysis, presented at 10th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), Aug. 2022 [DOI Article link] [bibTex]
- , Maestro: An Extensible General-Purpose Data Gathering and Classification Platform, presented at 30th International Conference on Information Systems Development, Aug. 2022 [bibTex]
- , Towards the Evaluation of Software Products from an Environmental Sustainability Perspective, presented at 30th International Conference on Information Systems Development, Aug. 2022 [bibTex]
- , Assessing the Impact of Attention and Self-Attention Mechanisms on the Classification of Skin Lesions, presented at IEEE International Joint Conference on Neural Networks, Jul. 2022 [bibTex] [PDF]
- , Comparing Different Approaches for Detecting Hate Speech in Online Portuguese Comments, presented at 11th Symposium on Languages, Applications and Technologies (SLATE 2022), Jul. 2022 [DOI Article link] [bibTex]
- , Semi-Supervised Annotation of Portuguese Hate Speech Across Social Media Domains, presented at 11th Symposium on Languages, Applications and Technologies (SLATE 2022), Jul. 2022 [DOI Article link] [bibTex]
- , A new European Portuguese corpus for the study of Psychosis through speech analysis, presented at Proceedings of the Thirteenth Language Resources and Evaluation Conference, LREC2022, Jun. 2022 [bibTex] [PDF]
- , Hate Speech Dynamics Against African descent, Roma and LGBTQI Communities in Portugal, presented at LREC 2022 - 13th Conference on Language Resources and Evaluation, Jun. 2022 [bibTex]
- , Towards the Art of Writing Agile Requirements with User Stories, Acceptance Criteria, and Related Constructs, presented at ENASE'2022, Apr. 2022 [bibTex]
- , Consolidation of massive medical emergency events with heterogeneous situational context data sources, presented at 6th International workshop on Data Analytics solutions for Real-LIfe APplications @ EDBT/ICDT 2022, Mar. 2022 [bibTex] [PDF]
- , Automatic Generation of Neural Architecture Search Spaces, presented at AAAI-2022 Workshop on Combining Learning and Reasoning: Programming Languages, Formalisms, and Representations (CLeaR), Feb. 2022 [bibTex]
- , Functional characterization of transcriptional regulatory networks of yeast species, presented at International School and Conference on Network Science (NetSciX'22), Feb. 2022 [DOI Article link] [bibTex]
- , Platform-Independent Specifications for Robotic Process Automation Applications, presented at International Conference on Model-Driven Engineering and Software Development (MODELSWARD'2022), Feb. 2022 [bibTex]
2021
- , A Reference Motivation Layer for Smart Health – an Enterprise Architecture Approach, presented at Enterprise Engineering Working Conference (EEWC 2021), Dec. 2021 [bibTex]
- , Automation of Enterprise Architecture Discovery based on Event Mining from API Gateway logs: State of the Art, presented at IEEE 23rd Conference on Business Informatics (CBI), to appear on 2021 [DOI Article link] [bibTex]
- , Collaborative discovery and enrichment of business process models using a semantification approach, presented at IEEE 23rd Conference on Business Informatics (CBI), to appear on 2021 [DOI Article link] [bibTex]
- , Designing an IT Risk Management Ontology grounded on Systematic Literature Review to reduce implementation effort, presented at 54th HICSS, to appear on 2021 [DOI Article link] [bibTex]
- , EcoAndroid: An Android Studio Plugin for Developing Energy-Efficient Java Mobile Applications, presented at 2021 IEEE 21st International Conference on Software Quality, Reliability and Security (QRS), Dec. 2021 [DOI Article link] [bibTex] [PDF]
- , Encoder-decoder architectures for clinically relevant coronary artery segmentation, presented at 11th International Conference on Computational Advances in Bio and medical Sciences, Dec. 2021 [bibTex] [PDF]
- , Fitting Regularized Population Dynamics with Neural Differential Equations, presented at NeurIPS 2021, The Symbiosis of Deep Learning and Differential Equations (DLDE) workshop, Dec. 2021 [bibTex]
- , Discovering Conflicts of Interest across Heterogeneous Data Sources with ConnectionLens (demo paper), presented at ACM International Conference on Information and Knowledge Management (CIKM 2021), Nov. 2021 [bibTex]
- , Using Recurrent Neural Networks to model the dynamic behaviour of the C. Elegans nervous system, presented at Champalimaud Research Symposium 2021, Oct. 2021 [bibTex]
- , Assessing Robustness in Multimodal Transportation Systems: A case study in Lisbon, presented at European Transport Conference (ETC), Sep. 2021 [bibTex]
- , Enabling Cross- Jurisdiction Digital Asset Transfer, presented at IEEE International Conference on Services Computing (SCC), Sep. 2021 [bibTex]
- , Generating Test Cases from Use Cases and Structured Scenarios: Experiences with the RSL Language, presented at International Conference on Information Systems Development'2021, Sep. 2021 [bibTex]
- , Inference of Dynamic Origin-Destination Matrices with Trip and Transfer Status from Individual Smart Card Data, presented at European Transport Conference (ETC), Sep. 2021 [bibTex]
- , MuSyFI - Music Synthesis From Images, presented at International Conference on Computational Creativity, ICCC’21, Sep. 2021 [bibTex]
- , Using Soft Labels to Model Uncertainty in Medical Image Segmentation, presented at MICCAI Brain Lesion workshop, Sep. 2021 [bibTex] [PDF]
- , Video-based tracking of fishes in the Lisbon Oceanarium, presented at OCEANS 2021, Sep. 2021 [bibTex]
- , Where are the Passengers? Individual Passenger Route Choice Estimation from Gate Information in Urban Rail Transit Systems, presented at European Transport Conference (ETC), Sep. 2021 [bibTex]
- , Virtual Static Security Analyzer for Web Applications, presented at Trustcom, Aug. 2021 [bibTex]
- , Combining Off and On-Policy Training in Model-Based Reinforcement Learning, presented at Adaptive and Learning Agents @ AAMAS 2021, Jun. 2021 [bibTex] [PDF]
- , Eliciting Fairness in Multiplayer Bargaining through Network-based Role Assignment, presented at 20th International Conference on Autonomous Agents and Multiagent Systems (AAMAS 2021), May. 2021 [bibTex] [PDF]
- , Enterprise Architecture Patterns for GDPR Compliance, presented at 23rd International Conference on Enterprise Information Systems (ICEIS 2021), Apr. 2021 [bibTex]
- , Framing Enterprise Engineering within General System’s Theory: Perspectives of a Human Centered Future, presented at 10th Enterprise Engineering Working Conference (EEWC), Apr. 2021 [bibTex]
- , From Music to Image, a Computational Creativity Approach, presented at Artificial Intelligence in Music, Sound, Art and Design. EvoMUSART, Apr. 2021 [DOI Article link] [bibTex]
- , Privacy by Design Enterprise Architecture Patterns, presented at 23rd International Conference on Enterprise Information Systems (ICEIS 2021), Apr. 2021 [bibTex]
- , Sculpture Inspired Musical Composition, One Possible Approach, presented at Artificial Intelligence in Music, Sound, Art and Design. EvoMUSART, Apr. 2021 [DOI Article link] [bibTex]
- , Systematic Selection and Prioritization of Communication Channels in the Healthcare Sector, presented at 23rd International Conference on Enterprise Information Systems (ICEIS 2021), Apr. 2021 [bibTex]
- , UNIANO: robust and efficient anomaly consensus in time series sensitive to cross-correlated anomaly profiles, presented at SIAM International Conference on Data Mining, Apr. 2021 [bibTex]
- , Decentralized Enforcement of DEMO Action Rules Using Blockchain Smart Contracts, presented at 10th Enterprise Engineering Working Conference (EEWC), Mar. 2021 [bibTex]
- , Integrating Benefits Dependency Network in ArchiMate, 10th Enterprise Engineering Working Conference (EEWC, Mar. 2021 [bibTex]
- , “A Machine Learning Approach for Real Time Prediction of Last Minute Medical Appointments No-Shows, presented at 14th International Conference on Health Informatics (HEALTHINF 2021), Feb. 2021 [bibTex]
- , Acronym Expander at SDU@AAAI-21: an Acronym Disambiguation Module, presented at Proceedings of the Workshop on Scientific Document Understanding co-located with 35th AAAI Conference on Artificial Intelligence (SDU@AAAI 2021), Feb. 2021 [bibTex]
- , fMRI Multiple Missing Values Imputation Regularized by a Recurrent Denoiser, presented at Artificial Intelligence in Medicine (AIME), Feb. 2021 [bibTex]
- , Designing an IT Risk Management Ontology grounded on Systematic Literature Review, presented at Hawaii International Conference on System Sciences, Jan. 2021 [bibTex]
- , Designing and Validating a Blockchain-based Architecture to Enforce Privacy in Human Robot Interaction, presented at Hawaii International Conference on System Sciences, Jan. 2021 [bibTex]
- , Mobile Marketing in Health: User Experience Guiding the Implementation of a Medical Booking Application, presented at Biomedical Engineering Systems and Technologies. BIOSTEC 2020, Jan. 2021 [DOI Article link] [bibTex]
- , Process Digitalization using Blockchain –EU Parliament Elections Case Study, presented at Proceedings of the 9th International Conference on Model-Driven Engineering and Software Development (MODELSWARD), Jan. 2021 [DOI Article link] [bibTex]
- , Reference Architecture for Project, Program and Portfolio Governance, presented at 22nd International Conference on Enterprise Information Systems, ICEIS 2020, Virtual Event, Revised Selected Papers, Jan. 2021 [bibTex]
National Conferences: 1
2022
- , Securing Cross-Chain Asset Transfers on Permissioned Blockchains, presented at First Workshop on Blockchain Technologies and Trusted Execution Environments (BlockTEE 2022), Jun. 2022 [bibTex] [Video]
Dissertations
PhD Theses: 3
2023
- advised by Helena Galhardas and Dennis Shasha, Towards Effective and Effortless Data Cleaning: from Automatic Approaches to User Involvement, PhD Thesis at Instituto Superior Técnico, Feb. 2023 [bibTex]
2022
- advised by Susana Vinga and Luís Costa, Computational Biology for Modeling Oncological Omics Data: the way towards personalized medicine, PhD Thesis at Instituto Superior Técnico, Dec. 2022 [bibTex]
2021
- advised by Susana Vinga and Arlindo L. Oliveira, Network-based sparse regularization for the identification of disease signatures, PhD Thesis at Instituto Superior Técnico, Feb. 2021 [bibTex]
MSc Theses: 46
2022
- advised by Susana Vinga, Classification of microcytic anaemias using machine learning methods, MSc Thesis, Nov. 2022 [bibTex]
- advised by Mário J. Silva and José Maria Moreira, Predicting Imminet Health Outcomes from Lab Results, MSc Thesis at Instituto Superior Tecnico, Nov. 2022 [bibTex]
- advised by Paula Carvalho and Fernando Batista, Semi-Automatic Selection and Annotation of Hate Speech from Social Media, MSc Thesis at Instituto Superior Técnico, Nov. 2022 [bibTex]
- advised by Susana Vinga and Emanuel Gonçalves, Sparse and Interpretable Models for Drug Mechanism-of-Action Discovery, MSc Thesis at Instituto Superior Técnico, Nov. 2022 [bibTex]
- advised by Arlindo L. Oliveira, Aceleração da Aprendizagem por Reforço Usando Arquitecturas de Redes Neuronais Profundas Baseadas em Transformadores, MSc Thesis at Instituto Superior Técnico, Oct. 2022 [bibTex]
- advised by Arlindo L. Oliveira, Metodos para Segmentação de Imagens usando Arquitecturas como Mecanismos de Atenção, MSc Thesis at Instituto Superior Técnico, Oct. 2022 [bibTex]
- advised by Arlindo L. Oliveira and Catarina Fonseca, Prognostico de Acidentes Vasculares Cerebrais com Base em Tomografia Computorizada Usando a Aprendizagem Profunda, MSc Thesis, Oct. 2022 [bibTex]
- advised by Susana Vinga and Alexandra Carvalho, Multivariate Time-Series Modeling of Shellfish Contamination with Dynamic Bayesian Networks, MSc Thesis, Jun. 2022 [bibTex]
2021
- advised by Sérgio Guerreiro, Collaborative discovery and enrichment of business process models using a semantification approach, MSc Thesis at Instituto Superior Técnico, work in progresson 2021 [bibTex]
- advised by Bruno Martins, Convolutional Neural Networks for the Classification of 3D Medical Images, MSc Thesis, work in progresson 2021 [bibTex]
- advised by Rui Miguel Carrasqueiro Henriques, Generative modeling of demand in the public transport network in the city of Lisbon: context-sensitive and multi-modal dynamics, MSc Thesis, Dec. 2021 [bibTex]
- advised by H. Sofia Pinto, From Music to Animations, A Computational Creativity Approach, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2021 [bibTex]
- advised by H. Sofia Pinto and José Borbinha, Local Web Application Development, Framework Proposal and Demonstration on Two Case Studies, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Nov. 2021 [bibTex]
- advised by Susana Vinga and Marta Lopes, Time Series Analysis and Forecasting of Shellfish Contamination and Safety, MSc Thesis, Nov. 2021 [bibTex]
- advised by Mário J. Silva, Identifying patient subgroups in chronic diseases by phenotypic clustering, MSc Thesis at Instituto Superior Técnico, Oct. 2021 [bibTex]
- advised by H. Sofia Pinto and David Martins de Matos, GiTab: Automatic Tablature Music Composition for Classical Guitar, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Sep. 2021 [bibTex]
- advised by Susana Vinga and Alexandra M. Carvalho, Sparse Dynamic Bayesian network estimation using generalized linear models, MSc Thesis, Sep. 2021 [bibTex]
- advised by Susana Vinga and Alexandra M. Carvalho, Survival analysis of transcriptomic high-dimensional oncological data for the identification of cancer biomarkers, MSc Thesis, Sep. 2021 [bibTex]
- advised by André Vasconcelos, Privacy by Design Enterprise Architecture Patterns, MSc Thesis at Instuto Superior Tecnico, Aug. 2021 [bibTex]
- advised by Susana Vinga and Alexandra Carvalho, Dynamic Bayesian networks for clinical decision support on ankylosing spondylitis patients under biological therapies, MSc Thesis, Jul. 2021 [bibTex]
- advised by Susana Vinga and Alexandra Carvalho, Predicting Ankylosing Spondylitis Treatment Outcome Using Model-based Methods, MSc Thesis, Jul. 2021 [bibTex]
- advised by Rui Miguel Carrasqueiro Henriques and Diogo Ferreira, An exploratory analysis of Portuguese hospital relationships on behalf of financial sustainability, MSc Thesis, Feb. 2021 [bibTex]
- advised by Rui Miguel Carrasqueiro Henriques and Elisabete Arsénio, Análise de fluxos na rede pública de autocarros de Lisboa, MSc Thesis, Feb. 2021 [bibTex]
- advised by Rui Miguel Carrasqueiro Henriques and Elisabete Arsénio, Descoberta de padrões circulação multimodal apartir de fontes heterógeneas de dados urbanos, MSc Thesis, Feb. 2021 [bibTex]
- advised by Rui Miguel Carrasqueiro Henriques and Rafael Costa, Descoberta de padrões em dados oncológicos para a compreensão dos factores de risco cirúrgico, MSc Thesis, Feb. 2021 [bibTex]
- advised by H. Sofia Pinto and A. P. Francisco, Analysis of retweeting behaviour on Twitter, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
- advised by Arlindo L. Oliveira and Mário Figueiredo, Automated Assessment of Coronary Artery Stenosis in X-ray Angiography using Deep Neural Networks, MSc Thesis, Jan. 2021 [bibTex]
- advised by Sérgio Guerreiro and João Silva Sequeira, BlockRobot: Increasing Privacy in Human Robot Interaction by Using Blockchain, MSc Thesis at Instuto Superior Tecnico, Jan. 2021 [bibTex]
- advised by Susana Vinga and Alexandra Carvalho, Cloud-based web application for multivariate time series analysis: A language-agnostic integrative architecture for short- and long-running machine learning algorithms, MSc Thesis, Jan. 2021 [bibTex]
- advised by Arlindo L. Oliveira, Combining Off and On-policy Training in Deep Reinforcement Learning, MSc Thesis at IST, Jan. 2021 [bibTex]
- advised by André Vasconcelos and Ricardo Ribeiro, Contact Agent Assistant, MSc Thesis, Jan. 2021 [bibTex]
- advised by Helena Galhardas and Nuno J. Mamede, Degree Coordination Decision Support System, MSc Thesis, Jan. 2021 [bibTex]
- advised by Rui Miguel Carrasqueiro Henriques and Susana Vinga, Descriptive and predictive modeling of water distribution network dynamics using multivariate time series data, MSc Thesis, Jan. 2021 [bibTex]
- advised by Sérgio Guerreiro and Pedro Manuel Moreira Vaz Antunes de Sousa, Dynamic Stable Business Process Operation for Cyber Security Enforcement Using Atlas, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
- advised by H. Sofia Pinto and Nuno Correia, From Movement to Sound and Music, a Computational Creativity approach, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
- advised by Alberto Rodrigues da Silva, From Rigorous Requirements and User Interfaces Specifications into Software Business Applications: The ASL Approach, MSc Thesis, Jan. 2021 [bibTex]
- advised by Sérgio Guerreiro and Pedro Manuel Moreira Vaz Antunes de Sousa, Implementação de Demo Action Model em Blockchain Smart Contracts, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
- advised by Arlindo L. Oliveira and A. P. Francisco, Imputation Techiques for Clinical Data of Ischemic Stroke Patients, MSc Thesis at IST, Jan. 2021 [bibTex]
- advised by Helena Galhardas, IST CSE Information System, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
- advised by Sérgio Guerreiro and Ruben Pereira, IT Risk Management Ontology from representation to optimization using Enterprise Ontology, MSc Thesis at Instituto Superior Técnico\, Jan. 2021 [bibTex]
- advised by Susana Vinga and Alexandra Carvalho, Machine Learning methods for finding predictors of Rheumatoid Arthritis treatment response, MSc Thesis, Jan. 2021 [bibTex]
- advised by H. Sofia Pinto and Rui Pereira Jorge, Music Creation from Found Sounds - An Approach from Computational Creativity, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
- advised by Alberto Rodrigues da Silva and Jacinto Estima, RiverCure Portal: Exploring Geographic Features on Context Definition and Integration with the HiSTAV Hydrometric Toll, MSc Thesis at Instituto Superior Técnico, Jan. 2021 [bibTex]
- advised by Rodrigo Rodrigues, SCALEET: A Scalable and Performant Permissionless Blockchain, MSc Thesis, Jan. 2021 [bibTex]
- advised by José Borbinha and H. Sofia Pinto, Ser Músico em Portugal - Publicação e Visualização de dados com Solução Mediawiki e Arquitetura MVC, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
- advised by H. Sofia Pinto and Alexandre Bernardino, Tracking animals in underwater videos, MSc Thesis at Instituto Superior Técnico, Universidade de Lisboa, Jan. 2021 [bibTex]
as Editors
Other Publications: 2
2021
- , editors, The ROAD to resilient location for the Internet of Vehicles, Nov. 2021, IEEE [bibTex] [PDF]
- , editors, Acronym Expander at SDU@AAAI-21: an Acronym Disambiguation Module, Feb. 2021 [bibTex]
Special Issues of Journals (editor): 1
2021
- , editors, Special Issue on Content Credibility, Journal of Web Semantics vol. 71 (11), Nov. 2021, Elsevier [DOI Editorial link] [bibTex]
Reports
Technical Reports: 1
2021
- , IST CSE Doctoral Degree Information Management System: Requirements Specification, INESC-ID Tec. Rep. 1/2021, Jan. 2021 [bibTex] [PDF]