Publications
Filter Publications: 2021 - 2023
Books
Book Chapters: 1
2022
- , Prediction of Gene and Genomic Regulation in Candida Species, Using the PathoYeastract Database: A Comparative Genomics Approach, chapter of Yeast Functional Genomics. Methods in Molecular Biology, May. 2022, Humana [bibTex]
Articles
International Journal Articles: 8
2023
- , YEASTRACT+: a portal for the exploitation of global transcription regulation and metabolic model data in yeast biotechnology and pathogenesis, article in Nucleic Acids Research vol. 51 pp. D785–D791, Jan. 2023, Oxford University Press [DOI Article link] [bibTex]
2022
- , Introducing UniCorT: A University Course Timetabling Tool, article in Journal of Scheduling, to appear on 2022, Springer [DOI Article link] [bibTex]
- , Boolean function metrics can assist modelers to check and choose logical rules, article in Journal of Theoretical Biology vol. 538 pp. 111025, Apr. 2022, Elsevier [DOI Article link] [bibTex]
2021
- , Prediction and Boolean logical modelling of synergistic microRNA regulatory networks during reprogramming of male germline pluripotent stem cells, article in Biosystems vol. 207, Sep. 2021, Elsevier [DOI Article link] [bibTex]
- , The N.C.Yeastract and CommunityYeastract databases to study gene and genomic transcription regulation in non-conventional yeasts, article in FEMS Yeast Research, Aug. 2021 [DOI Article link] [bibTex]
- , From a genome assembly to full regulatory network prediction: the case study of Rhodotorula toruloides putative Haa1-regulon, article in BMC Bioinformatics, Jul. 2021, accepted [bibTex]
- , Transcriptome-wide differences between Saccharomyces cerevisiae and Saccharomyces cerevisiae var. boulardii: clues on host survival and probiotic activity based on promoter sequence variability, article in Genomics vol. 113 (2), Mar. 2021 [DOI Article link] [bibTex]
- , Disruptions in Timetables: A Case Study at Universidade de Lisboa, article in Journal of Scheduling vol. 24 (1) pp. 35-48, Feb. 2021 [bibTex]
International Conferences: 2
2023
- , Community structure in transcriptional regulatory networks of yeast species, presented at International Conference on Complex Networks (CompleNet), Apr. 2023 [bibTex]
2022
- , Functional characterization of transcriptional regulatory networks of yeast species, presented at International School and Conference on Network Science (NetSciX'22), Feb. 2022 [DOI Article link] [bibTex]
National Conferences: 2
2022
- , Community detection for the characterization of transcriptional regulatory networks of yeast species, presented at INForum, Sep. 2022 [bibTex]
- , Predicting blood donor return in Portugal: the role of demographics, presented at 13th INForum - Simpósio de Informática (INForum'22), Sep. 2022 [bibTex]