Publications

Articles

International Journal Articles: 10

2020

- Carolina Peixoto and Marta Lopes and M Martins and L Costa and Susana Vinga, TCox: Correlation-Based Regularization Applied to Colorectal Cancer Survival Data, article in Biomedicines vol. 8 (11), Nov. 2020 [DOI Article link] [bibTex]
- R Miranda and Susana Vinga and D Valério, Studying Bone Remodelling and Tumour Growth for Therapy Predictive Control, article in Mathematics vol. 8, May. 2020 [DOI Article link] [bibTex]
- R Andrade and M Doostmohammadi and JL Santos and MF Sagot and NP Mira and Susana Vinga, MOMO - multi-objective metabolic mixed integer optimization: application to yeast strain engineering, article in BMC Bioinformatics vol. 21 (1), Feb. 2020 [DOI Article link] [bibTex]
- Marta Lopes and Susana Vinga, Tracking intratumoral heterogeneity in glioblastoma via regularized classification of single-cell RNA-Seq data, article in BMC Bioinformatics vol. 21 (1), Feb. 2020 [DOI Article link] [bibTex]

2019

- Kishan Rama and Helena Canhão and Alexandra M. Carvalho and Susana Vinga, AliClu - Temporal sequence alignment for clustering longitudinal clinical data, article in BMC Medical Informatics and Decision Making vol. 19, Dec. 2019 [DOI Article link] [bibTex] [PDF]
- Duarte Valério and J Neto and Susana Vinga, Variable order 3D models of bone remodelling, article in Bulletin of the Polish Academy of Sciences-Technical Sciences vol. 67 (3), to appear on 2019 [DOI Article link] [bibTex]
- Segaert, P and Marta Lopes and Sandra Casimiro and Susana Vinga and Rousseeuw, PJ, Robust identification of target genes and outliers in triple-negative breast cancer data, article in Statistical Methods in Medical Research vol. 28 pp. 3042-3056, Nov. 2019 [DOI Article link] [bibTex] [PDF]
- Zielezinski, A and Girgis, HZ and Bernard, G and Leimeister, CA and Tang, KJ and Dencker, T and Lau, AK and Rohling, S and Choi, JJ and Waterman, MS and Comin, M and Kim, SH and Susana Vinga and Almeida, JS and Chan, CX and James, BT and Sun, FZ and Morgenstern, B and Karlowskr, WM, Benchmarking of alignment-free sequence comparison methods, article in Genome Biology vol. 20, Jul. 2019 [DOI Article link] [bibTex] [PDF]
- H Loureiro and Eunice Isabel Ganhão Carrasquinha Trigueirão and I Alho and AR Ferreira and L Costa and Alexandra M. Carvalho and Susana Vinga, Modelling cancer outcomes of bone metastatic patients: combining survival data with N-Telopeptide of type I collagen (NTX) dynamics through joint models, article in BMC Medical Informatics and Decision Making vol. 19, Jan. 2019 [DOI Article link] [bibTex]

International Conferences: 2

2020

- Miranda R and Susana Vinga and Valério D, Studying Bone Remodelling and Tumour Growth for Therapy Predictive Control, May. 2020 [DOI Article link] [bibTex]

2019

- Susana Vinga, Bridging computer science and bioengineering for the multiscale modeling of biological systems, Mar. 2019 [DOI Article link] [bibTex]