Publications

Articles

International Journal Articles: 3

2021

- Ricardo Nobre and Aleksandar Ilic and Sergio Santander-Jiménez and Leonel Sousa, Retargeting Tensor Accelerators for Epistasis Detection, article in IEEE Transactions on Parallel and Distributed Systems pp. 15, to appear on 2021, IEEE [bibTex]
- Diogo Augusto Pereira Marques and Aleksandar Ilic and Leonel Sousa, Mansard Roofline Model: Reinforcing the Accuracy of the Roofs, article in ACM Transactions on Modeling and Performance Evaluation of Computing Systems vol. 6 (2) pp. 1-23, Jun. 2021, ACM [DOI Article link] [bibTex]

2020

- Diogo Augusto Pereira Marques and Aleksandar Ilic and Zakhar Matveev and Leonel Sousa, adCARM: Application-driven Cache-Aware Roofline Model, article in Future Generation Computer Systems vol. 107 pp. 257-273, Jun. 2020, North-Holland [DOI Article link] [bibTex]

International Conferences: 6

2021

- Ricardo Nobre and Aleksandar Ilic and Sergio Santander-Jiménez and Leonel Sousa, Fourth-Order Exhaustive Epistasis Detection for the xPU Era, presented at ICPP 2021: 50th International Conference on Parallel Processing, Aug. 2021 [DOI Article link] [bibTex] [Video]
- Gaspar Minderico Ribeiro and Nuno Neves and Sergio Santander-Jiménez and Aleksandar Ilic, HEDAcc: FPGA-based Accelerator for High-order Epistasis Detection, presented at 2021 IEEE 29th Annual International Symposium on Field-Programmable Custom Computing Machines (FCCM), May. 2021 [DOI Article link] [bibTex]

2020

- Henrique R. A. Freitas and Celso Luiz Mendes and Aleksandar Ilic, Performance Optimization and Scalability Analysis of the MGB Hydrological Model, presented at International Conference On High Performance Computing, Data, And Analytics (HiPC), Dec. 2020 [bibTex]
- Rafael Torres Campos and Diogo Augusto Pereira Marques and Sergio Santander-Jiménez and Leonel Sousa and Aleksandar Ilic, Heterogeneous CPU+iGPU Processing for Efficient Epistasis Detection, presented at European Conference on Parallel Processing (EuroPar), Aug. 2020 [DOI Article link] [bibTex]
- Ricardo Nobre and Sergio Santander-Jiménez and Leonel Sousa and Aleksandar Ilic, Accelerating 3-way Epistasis Detection with CPU+GPU processing, presented at International Workshop on Job Scheduling Strategies for Parallel Processing (JSSPP), colocated with IPDPS, May. 2020 [bibTex]
- Ricardo Nobre and Aleksandar Ilic and Sergio Santander-Jiménez and Leonel Sousa, Exploring the Binary Precision Capabilities of Tensor Cores for Epistasis Detection, presented at 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS), May. 2020 [bibTex]

National Conferences: 1

2021

- Rafael Torres Campos and Diogo Augusto Pereira Marques and Sergio Santander-Jiménez and Leonel Sousa and Aleksandar Ilic, Epistasis Detection with DPC++ and OpenCL for Intel CPU and GPU, presented at INFORUM, Sep. 2021 [bibTex]